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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2907 and Psest_2908 overlap by 4 nucleotides
Psest_2908 and Psest_2909 overlap by 4 nucleotides
Psest_2909 and Psest_2910 are separated by 445 nucleotides
Psest_2910 and Psest_2911 are separated by 536 nucleotides
Psest_2907: Psest_2907 - Protein of unknown function (DUF3618)., at 3,099,155 to 3,099,916
_2907
Psest_2908: Psest_2908 - Protein of unknown function (DUF1469)., at 3,099,913 to 3,100,338
_2908
Psest_2909: Psest_2909 - hypothetical protein, at 3,100,335 to 3,101,093
_2909
Psest_2910: Psest_2910 - Endoglucanase, at 3,101,539 to 3,103,617
_2910
Psest_2911: Psest_2911 - Protein of unknown function (DUF2945)., at 3,104,154 to 3,104,366
_2911
Group
Condition
Psest
_2907
Psest
_2908
Psest
_2909
Psest
_2910
Psest
_2911
carbon source
D-Gluconic Acid (C)
-2.4
-0.4
-0.2
+0.2
-2.3
stress
Def 5-Hydroxymethylfurfural 5 mM
-2.2
-0.4
-0.2
-0.1
-1.0
stress
Chlorate 75 mM
-1.9
-0.0
+1.0
+0.2
-2.7
stress
methylglyoxal 0.0016 vol%
-2.4
-0.0
-0.6
+0.1
-0.4
stress
Nalidixic 0.00390625 mg/ml
-1.9
+0.3
-0.6
-0.2
-0.8
RCH2 grown on a colony of N2F3
-0.5
+0.2
-0.2
-0.1
-2.7
stress
perchlorate 25 mM
-1.3
-0.1
-0.8
+0.1
-0.5
RCH2 grown on a colony of N2C3
-3.1
+0.2
+0.6
+0.1
-0.5
stress
Furfuryl Alcohol 0.05 vol%
-0.9
-0.6
-0.9
-0.4
+0.2
nitrogen source
Parabanic Acid (N)
-1.7
+0.0
+0.5
-0.3
-0.6
RCH2 grown on a colony of N2A2
-2.0
+0.2
-0.4
+0.0
+0.7
carbon source
propionate (C)
+0.9
-0.0
-1.4
+0.5
-0.9
stress
Thallium(I) acetate 0.08 mg/ml
+1.1
-0.1
+0.5
+0.0
-2.5
metal limitation
Lactate-nitrite; anaerobic; sample2
+0.9
+0.2
-0.6
-0.3
-0.9
stress
Choline Lysine 20 mM
+1.0
+0.3
-0.3
+0.1
-1.8
stress
Vancomycin 0.016 mg/ml
-1.9
+0.2
+0.1
+0.0
+0.9
stress
Lactate-nitrate; anaerobic; copper stress sample1
+1.3
+0.3
-1.1
-0.2
-0.8
stress
1-ethyl-3-methylimidazolium acetate 40 mM
+1.2
-0.3
-0.7
-0.0
-0.7
nitrogen source
Putrescine (N)
-1.2
+0.1
+0.3
-0.3
+1.2
stress
Lactate-nitrate; anaerobic; copper stress sample3
+1.4
+0.4
-0.2
-0.3
-0.9
stress
Def Cephalothin 0.08 mg/ml
-1.2
+0.0
+0.5
+0.1
+1.4
carbon source
acetate (C)
+0.3
-0.5
-0.2
-0.4
+1.8
RCH2 grown on a colony of Serratia
+0.5
+0.3
+1.3
-0.1
-0.9
stress
Lactate-nitrate; anaerobic; cadmium stress sample1
+2.5
+0.2
-0.1
-0.2
-1.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-0.4
+0.5
-0.3
-0.1
+1.7
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.4
+0.3
-0.2
+0.2
+1.8
stress
L-Lysine 200 mM
-0.7
+0.2
+1.3
-0.1
+1.0
stress
Cholin acetate 40 mM
-0.5
-0.2
+0.3
+0.1
+2.0
stress
Cephalothin 0.04 mg/ml
+1.2
+0.4
+0.9
+0.5
-1.3
stress
2-Furfuraldehyde 0.05 vol%
+0.8
-0.4
+0.7
+0.2
+0.8
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