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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2906 and Psest_2907 are separated by 91 nucleotides
Psest_2907 and Psest_2908 overlap by 4 nucleotides
Psest_2908 and Psest_2909 overlap by 4 nucleotides
Psest_2909 and Psest_2910 are separated by 445 nucleotides
Psest_2906: Psest_2906 - tRNA_Thr_CGT, at 3,098,988 to 3,099,063
_2906
Psest_2907: Psest_2907 - Protein of unknown function (DUF3618)., at 3,099,155 to 3,099,916
_2907
Psest_2908: Psest_2908 - Protein of unknown function (DUF1469)., at 3,099,913 to 3,100,338
_2908
Psest_2909: Psest_2909 - hypothetical protein, at 3,100,335 to 3,101,093
_2909
Psest_2910: Psest_2910 - Endoglucanase, at 3,101,539 to 3,103,617
_2910
Group
Condition
Psest
_2906
Psest
_2907
Psest
_2908
Psest
_2909
Psest
_2910
stress
Chlorate 75 mM
-2.1
-1.9
-0.0
+1.0
+0.2
stress
methylglyoxal 0.0016 vol%
+0.1
-2.4
-0.0
-0.6
+0.1
stress
Furfuryl Alcohol 0.05 vol%
+0.2
-0.9
-0.6
-0.9
-0.4
anaerobic
Nitrite/ lactate media with Nitrite 20mM
-1.4
-1.1
+0.1
-0.1
-0.0
stress
Nalidixic 0.00390625 mg/ml
-0.1
-1.9
+0.3
-0.6
-0.2
stress
Def 5-Hydroxymethylfurfural 5 mM
+0.3
-2.2
-0.4
-0.2
-0.1
carbon source
D-Gluconic Acid (C)
+0.8
-2.4
-0.4
-0.2
+0.2
stress
Chloride 200 mM
-0.5
-1.6
+0.3
-0.4
+0.1
nutrient
L-tyrosine
-0.8
-1.1
-0.5
+0.4
-0.0
stress
Thallium(I) acetate 0.08 mg/ml
-1.1
-1.2
+0.3
+0.0
+0.1
RCH2 grown on a colony of N2A2
+0.4
-2.0
+0.2
-0.4
+0.0
stress
Paraquat dichloride 0.015 mg/ml
+0.4
-1.6
-0.5
-0.1
+0.1
RCH2 grown on a colony of N2C3
+0.6
-3.1
+0.2
+0.6
+0.1
nitrogen source
Parabanic Acid (N)
+0.2
-1.7
+0.0
+0.5
-0.3
stress
Dimethyl Sulfoxide 5 vol%
-1.2
+0.8
-0.1
-0.7
+0.0
stress
nitrite 2.5 mM
+1.0
-1.4
+0.1
-0.6
+0.1
stress
Nalidixic 0.00390625 mg/ml
+1.1
-0.2
-0.4
-0.9
+0.1
stress
1-ethyl-3-methylimidazolium acetate 40 mM
-0.6
+1.2
-0.3
-0.7
-0.0
RCH2 grown on a colony of Serratia
+2.0
-0.9
+0.2
-0.8
-0.1
stress
Doxycycline hyclate 0.0002 mg/ml
-1.1
+1.3
-0.2
+0.4
-0.0
carbon source
propionate (C)
+0.5
+0.9
-0.0
-1.4
+0.5
stress
Lactate-nitrate; anaerobic; copper stress sample1
+0.2
+1.3
+0.3
-1.1
-0.2
stress
L-Lysine 200 mM
+0.4
-0.7
+0.2
+1.3
-0.1
stress
Thallium(I) acetate 0.1 mg/ml
+0.6
+1.6
-0.2
-0.5
-0.1
stress
Lactate-nitrate; anaerobic; copper stress sample3
+0.4
+1.4
+0.4
-0.2
-0.3
stress
Lactate-nitrate; anaerobic; cadmium stress sample2
+1.2
+1.4
+0.1
-0.2
-0.3
stress
Lactate-nitrate; anaerobic; cadmium stress sample1
-0.2
+2.5
+0.2
-0.1
-0.2
stress
Def Carbenicillin 0.008 mg/ml
+1.6
+1.0
+0.2
+0.0
+0.3
RCH2 grown on a colony of Serratia
+1.9
+0.5
+0.3
+1.3
-0.1
stress
Cephalothin 0.04 mg/ml
+2.0
+1.2
+0.4
+0.9
+0.5
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