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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2867 and Psest_2868 are separated by 57 nucleotides
Psest_2868 and Psest_2869 are separated by 132 nucleotides
Psest_2869 and Psest_2870 are separated by 106 nucleotides
Psest_2870 and Psest_2871 are separated by 101 nucleotides
Psest_2867: Psest_2867 - hypothetical protein, at 3,056,736 to 3,057,134
_2867
Psest_2868: Psest_2868 - Phosphoketolase, at 3,057,192 to 3,059,606
_2868
Psest_2869: Psest_2869 - Predicted exonuclease of the beta-lactamase fold involved in RNA processing, at 3,059,739 to 3,061,148
_2869
Psest_2870: Psest_2870 - TIGR00730 family protein, at 3,061,255 to 3,062,346
_2870
Psest_2871: Psest_2871 - Uncharacterized protein conserved in bacteria, at 3,062,448 to 3,062,912
_2871
Group
Condition
Psest
_2867
Psest
_2868
Psest
_2869
Psest
_2870
Psest
_2871
carbon source
L-tyrosine (C)
N.D.
-0.3
-0.3
-1.1
N.D.
stress
Def 2-Furfuraldehyde 0.032 vol%
N.D.
-0.2
-0.2
-1.2
N.D.
carbon source
propionate (C)
N.D.
-0.3
-0.4
-0.7
N.D.
RCH2 grown on a colony of Serratia
N.D.
+0.3
-1.0
-0.6
N.D.
carbon source
L-Lactate (C)
N.D.
-0.2
-0.3
-0.7
N.D.
RCH2 grown on a colony of N2C3
N.D.
-0.0
-0.4
-0.7
N.D.
stress
nitrate 250 mM
N.D.
+0.2
-1.1
-0.1
N.D.
stress
Def Benzalkonium Chloride 0.002 mg/ml
N.D.
+0.1
-0.4
-0.6
N.D.
stress
Choline Lysine 20 mM
N.D.
+0.0
+0.2
-0.9
N.D.
stress
Chlorate 75 mM
N.D.
+0.5
-1.3
+0.1
N.D.
stress
Lactate-nitrate; anaerobic sample1
N.D.
-0.2
+0.2
-0.6
N.D.
stress
Cephalothin 0.04 mg/ml
N.D.
+0.2
-0.4
-0.4
N.D.
stress
nitrate 200 mM
N.D.
-0.1
-0.7
+0.4
N.D.
nutrient
L-Histidine
N.D.
-0.1
+0.5
-0.4
N.D.
stress
Lactate-nitrate; anaerobic; copper stress sample1
N.D.
+0.2
+0.3
-0.5
N.D.
stress
D-Cycloserine 0.032 mg/ml
N.D.
-0.5
+0.6
-0.1
N.D.
stress
Nalidixic 0.00390625 mg/ml
N.D.
+0.4
+0.4
-0.5
N.D.
stress
Lactate-nitrate; anaerobic; dichromate stress sample3
N.D.
-0.4
+0.4
+0.2
N.D.
stress
Def Carbenicillin 0.02 mg/ml
N.D.
+0.5
+0.2
-0.4
N.D.
stress
Polymyxin B sulfate 0.0001 mg/ml
N.D.
+0.8
-0.1
-0.3
N.D.
RCH2 grown on a colony of N2A2
N.D.
-0.3
+0.2
+0.5
N.D.
stress
D-Cycloserine 0.032 mg/ml
N.D.
-0.4
+0.8
-0.0
N.D.
RCH2 grown on a colony of N2F3
N.D.
+0.1
-0.4
+1.0
N.D.
stress
Nalidixic 0.00390625 mg/ml
N.D.
+0.5
+0.6
-0.4
N.D.
lb
LB
N.D.
-0.1
+0.3
+0.6
N.D.
RCH2 grown on a colony of Serratia
N.D.
-0.1
+0.2
+0.7
N.D.
RCH2 grown on a colony of ecoli
N.D.
-0.4
+0.9
+0.4
N.D.
stress
Furfuryl Alcohol 0.05 vol%
N.D.
-0.1
+0.5
+0.7
N.D.
stress
Lomefloxacin 0.0001 mM
N.D.
+0.2
+0.3
+0.5
N.D.
nitrogen source
L-Glutamic (N)
N.D.
+0.1
-0.3
+1.2
N.D.
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