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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2862 and Psest_2863 are separated by 113 nucleotides
Psest_2863 and Psest_2864 are separated by 24 nucleotides
Psest_2864 and Psest_2865 are separated by 245 nucleotides
Psest_2865 and Psest_2866 are separated by 12 nucleotides
Psest_2862: Psest_2862 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1, at 3,052,236 to 3,053,012
_2862
Psest_2863: Psest_2863 - Transcriptional regulator, at 3,053,126 to 3,054,052
_2863
Psest_2864: Psest_2864 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 3,054,077 to 3,054,727
_2864
Psest_2865: Psest_2865 - Predicted permease, DMT superfamily, at 3,054,973 to 3,055,884
_2865
Psest_2866: Psest_2866 - Uncharacterized conserved protein, at 3,055,897 to 3,056,607
_2866
Group
Condition
Psest
_2862
Psest
_2863
Psest
_2864
Psest
_2865
Psest
_2866
stress
Paraquat dichloride 0.015 mg/ml
-5.2
-5.3
+0.9
-0.3
-0.0
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.8
-2.4
-4.7
-0.5
-1.1
stress
Paraquat dichloride 0.015 mg/ml
-5.1
-3.8
+0.4
+0.3
-0.9
stress
Def Chloride 400 mM
-3.3
-2.9
-2.6
-0.2
+0.5
carbon source
L-Lactate (C)
-2.8
-2.6
-1.7
-0.7
-0.4
nitrogen source
nitrite (N)
-2.5
-3.2
-1.7
-0.6
-0.3
stress
Def Cephalothin 0.04 mg/ml
-0.5
-1.1
-5.0
-0.3
-0.5
carbon source
L-Glutamic (C)
-4.0
-1.9
-0.8
+0.0
-0.6
nitrogen source
nitrite (N)
-1.7
-2.4
-2.8
-0.3
-0.0
carbon source
L-Glutamic (C)
-4.3
-1.9
-0.8
+0.1
+0.2
carbon source
D-Alanine (C)
-1.2
-0.6
-5.3
+0.1
+0.4
stress
Def Polymyxin B sulfate 0.0001 mg/ml
-2.9
-1.9
-1.2
-0.1
+0.1
stress
Def Polymyxin B sulfate 0.00008 mg/ml
-2.5
-2.4
-0.7
-0.4
-0.0
nitrogen source
nitrite (N)
-1.3
-1.5
-2.6
-0.4
-0.1
carbon source
Trisodium citrate (C)
-3.1
-2.5
+0.1
-0.1
-0.1
stress
sodium fluoride 6.25 mM
-3.1
-2.1
-0.2
-0.1
+0.1
carbon source
RCH2 defined media
-2.4
-1.9
-0.5
-0.2
-0.3
stress
benzoic 0.4 mg/ml
-2.3
-1.2
-0.4
-0.5
-0.7
carbon source
Trisodium citrate (C)
-3.2
-1.5
+0.0
+0.0
-0.1
nitrogen source
L-Alanine (N)
-1.1
-1.6
-2.3
-0.2
+0.7
stress
Nickel (II) chloride 0.8 mM
-3.0
-2.0
+0.5
-0.1
+0.0
nitrogen source
nitrite (N)
-1.5
-0.8
-2.2
+0.4
-0.3
stress
Def Thallium(I) acetate 0.125 mg/ml
-2.1
-1.8
-0.3
+0.7
+0.2
carbon source
Glycolic Acid (C)
-3.0
-1.3
+1.2
-0.0
-0.0
stress
nitrate 200 mM
-2.6
-2.1
+0.1
-0.0
+1.7
carbon source
L-tyrosine (C)
+0.9
+0.3
-3.4
+0.0
-0.2
carbon source
propionate (C)
-0.6
-0.2
+4.9
+0.2
+0.5
stress
Bacitracin 0.25 mg/ml
+2.9
+2.1
+0.3
+0.0
+0.5
stress
Bacitracin 0.25 mg/ml
+3.0
+2.4
+1.0
+0.1
+0.3
stress
A22 0.005 mg/ml
+5.3
+3.0
+0.2
+0.0
-0.3
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