Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2801 and Psest_2802 are separated by 257 nucleotidesPsest_2802 and Psest_2803 are separated by 156 nucleotidesPsest_2803 and Psest_2804 overlap by 58 nucleotidesPsest_2804 and Psest_2806 are separated by 533 nucleotides Psest_2801: Psest_2801 - hypothetical protein, at 2,991,097 to 2,991,612 _2801 Psest_2802: Psest_2802 - Na+/proline symporter, at 2,991,870 to 2,993,807 _2802 Psest_2803: Psest_2803 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 2,993,964 to 2,994,884 _2803 Psest_2804: Psest_2804 - hypothetical protein, at 2,994,827 to 2,994,964 _2804 Psest_2806: Psest_2806 - RNA polymerase sigma factor RpoS, at 2,995,498 to 2,996,493 _2806
Group Condition Psest_2801 Psest_2802 Psest_2803 Psest_2804 Psest_2806
stress Chlorate 75 mM -1.4 -0.0 -0.1 N.D. -0.5
RCH2 grown on a colony of Serratia -0.9 -0.3 +0.0 N.D. -0.7
carbon source propionate (C) -0.5 -0.0 -0.4 N.D. -0.9
carbon source Glycolic Acid (C) -0.1 -0.1 -0.3 N.D. -0.9
stress nitrate 250 mM -0.7 -0.1 -0.5 N.D. -0.1
stress Nickel (II) chloride 1 mM -1.0 +0.1 -0.1 N.D. -0.2
nitrogen source nitrite (N) -0.6 -0.1 +0.2 N.D. -0.7
stress Benzalkonium Chloride 0.002 mg/ml -0.0 -0.3 -0.9 N.D. +0.3
carbon source L-Leucine (C) +0.1 -0.1 +0.2 N.D. -1.1
stress L-Lysine 200 mM +0.4 -0.1 -0.4 N.D. -0.6
stress syringaldehyde 4 mM -0.5 +0.1 +0.1 N.D. -0.6
nitrogen source nitrate (N) -0.4 -0.1 +0.4 N.D. -0.5
stress Def Carbenicillin 0.008 mg/ml -0.2 -0.2 -0.7 N.D. +0.5
nitrogen source L-Valine (N) +0.2 +0.0 +0.4 N.D. -1.1
stress Fusidic 0.016 mg/ml -0.9 -0.0 -0.3 N.D. +0.7
stress Lactate-nitrate; anaerobic; copper stress sample2 -0.8 +0.1 -0.0 N.D. +0.4
stress Vancomycin 0.016 mg/ml +0.7 -0.1 -0.4 N.D. -0.3
stress Paraquat dichloride 0.015 mg/ml -0.9 +0.2 +0.2 N.D. +0.5
carbon source RCH2 defined media -0.2 +0.1 -0.3 N.D. +0.9
nitrogen source L-Glutamic (N) +0.7 +0.0 +0.4 N.D. -0.4
carbon source L-tyrosine (C) -0.5 +0.3 +0.6 N.D. +0.4
stress Def Benzalkonium Chloride 0.002 mg/ml +0.4 +0.3 -0.3 N.D. +0.3
stress Def 2-Furfuraldehyde 0.032 vol% +0.7 +0.2 -0.1 N.D. +0.4
carbon source D-Gluconic Acid (C) +0.9 +0.1 +0.5 N.D. -0.2
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.3 +0.2 -0.1 N.D. +0.9
carbon source L-Alanine (C) +0.4 -0.1 +0.2 N.D. +0.9
carbon source L-tyrosine (C) +0.2 +0.5 +0.6 N.D. +0.5
carbon source butyrate (C) +0.2 +0.1 +0.0 N.D. +2.5
carbon source D-Fructose (C) +0.1 -0.1 +0.1 N.D. +2.6
carbon source D-Fructose (C) +0.3 -0.0 +0.1 N.D. +3.2
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