Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2798 and Psest_2799 are separated by 223 nucleotidesPsest_2799 and Psest_2800 are separated by 3 nucleotidesPsest_2800 and Psest_2801 are separated by 84 nucleotidesPsest_2801 and Psest_2802 are separated by 257 nucleotides Psest_2798: Psest_2798 - Truncated hemoglobins, at 2,989,005 to 2,989,445 _2798 Psest_2799: Psest_2799 - Xanthosine triphosphate pyrophosphatase, at 2,989,669 to 2,990,217 _2799 Psest_2800: Psest_2800 - hypothetical protein, at 2,990,221 to 2,991,012 _2800 Psest_2801: Psest_2801 - hypothetical protein, at 2,991,097 to 2,991,612 _2801 Psest_2802: Psest_2802 - Na+/proline symporter, at 2,991,870 to 2,993,807 _2802
Group Condition Psest_2798 Psest_2799 Psest_2800 Psest_2801 Psest_2802
metal limitation Lactate-nitrite with YE; anaerobic; with copper; sample2 -1.4 -0.4 +0.0 -0.6 -0.0
stress Lactate-nitrate; anaerobic; nickel stress sample2 -1.6 -0.2 -0.3 -0.2 -0.0
stress Lactate-nitrate; anaerobic; copper stress sample2 -1.2 -0.0 -0.2 -0.8 +0.1
anaerobic Nitrate/ lactate media with Nitrate 250mM -1.4 +0.1 -0.2 -0.5 -0.1
stress Nalidixic 0.00390625 mg/ml -1.5 -0.3 -0.3 +0.5 -0.3
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -1.6 -0.2 +0.1 -0.4 +0.2
anaerobic Nitrite/ lactate media with Nitrite 20mM -1.2 -0.0 -0.2 -0.3 +0.0
nitrogen source L-Citrulline (N) -1.6 -0.1 -0.2 +0.3 -0.1
stress Chlorate 75 mM -0.5 +0.2 +0.1 -1.4 -0.0
stress Benzethonium chloride 0.01 mM -1.4 -0.2 +0.2 -0.1 +0.0
stress Doxycycline hyclate 0.0002 mg/ml -1.3 -0.2 +0.1 +0.2 -0.1
stress syringaldehyde 4 mM -0.6 -0.4 +0.2 -0.5 +0.1
carbon source propionate (C) -1.2 +0.7 +0.0 -0.5 -0.0
stress Nickel (II) chloride 1 mM +0.3 -0.3 +0.3 -1.0 +0.1
carbon source propionate (C) -0.9 +0.7 -0.3 -0.2 +0.1
stress nitrate 250 mM +0.7 -0.0 +0.2 -0.7 -0.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.6 +0.4 -0.3 -0.5 +0.0
stress Spectinomycin 0.00625 mg/ml +0.9 +0.1 -0.3 -0.5 +0.1
stress benzoic 0.4 mg/ml +0.5 -0.3 -0.1 +0.7 -0.3
stress Cobalt chloride 0.08 mM +1.0 -0.1 +0.2 -0.5 -0.1
stress 2-Furfuraldehyde 0.05 vol% +0.8 -0.5 +0.5 +0.2 -0.3
stress Paraquat dichloride 0.015 mg/ml +0.8 +0.5 +0.1 -0.9 +0.2
RCH2 grown on a colony of N2F3 +1.0 -0.2 -0.1 +0.3 -0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.9 -0.3 -0.1 +0.6 -0.0
temperature LB 30C timecourse2 timepoint 2 +1.2 +0.1 -0.0 -0.3 +0.1
carbon source butyrate (C) +1.0 +0.1 +0.5 +0.2 +0.1
stress Zinc 0.12 mM +1.1 -0.1 +0.4 +0.5 +0.1
stress 2-Furfuraldehyde 0.05 vol% +0.6 +0.4 +0.7 +0.5 +0.1
stress Def 2-Furfuraldehyde 0.032 vol% +0.9 -0.2 +0.8 +0.7 +0.2
carbon source L-tyrosine (C) +2.4 -0.3 +0.4 +0.2 +0.5
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