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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2769 and Psest_2770 are separated by 276 nucleotides
Psest_2770 and Psest_2771 are separated by 75 nucleotides
Psest_2771 and Psest_2772 are separated by 248 nucleotides
Psest_2772 and Psest_2773 are separated by 12 nucleotides
Psest_2769: Psest_2769 - hypothetical protein, at 2,964,397 to 2,964,834
_2769
Psest_2770: Psest_2770 - Superfamily II DNA and RNA helicases, at 2,965,111 to 2,967,471
_2770
Psest_2771: Psest_2771 - Predicted membrane protein, at 2,967,547 to 2,968,311
_2771
Psest_2772: Psest_2772 - MIP family channel proteins, at 2,968,560 to 2,969,441
_2772
Psest_2773: Psest_2773 - glycerol kinase, at 2,969,454 to 2,970,962
_2773
Group
Condition
Psest
_2769
Psest
_2770
Psest
_2771
Psest
_2772
Psest
_2773
carbon source
Glycerol (C)
+0.0
-0.1
+0.1
-3.7
-3.4
carbon source
Glycerol (C)
+0.1
+0.2
+0.3
-3.7
-3.2
stress
Cobalt chloride 0.07 mM
-0.1
-0.0
-1.0
-1.8
-0.9
stress
Cholin acetate 40 mM
-0.3
-0.2
-1.2
-1.1
-1.2
stress
1-ethyl-3-methylimidazolium acetate 40 mM
-0.3
-0.5
+0.2
-1.6
-1.4
RCH2 grown on a colony of Serratia
-0.5
+0.3
-1.1
+0.2
-2.4
stress
L-Lysine 200 mM
-0.4
-0.3
+0.1
-1.3
-1.6
stress
Cobalt chloride 0.08 mM
+0.2
-0.3
-1.2
-0.8
-1.4
stress
L-Lysine 200 mM
+0.1
+0.1
+0.0
-1.5
-1.8
stress
Carbenicillin 0.008 mg/ml
+0.7
-0.4
+0.4
-1.0
-1.7
RCH2 grown on a colony of N2F3
+0.6
-0.5
-1.4
-0.1
-0.7
stress
acetate 80 mM
+0.1
-0.3
+1.0
-1.1
-1.0
stress
Bacitracin 0.25 mg/ml
-0.1
+0.4
+1.0
-0.9
-1.2
stress
Def Cephalothin 0.04 mg/ml
-0.3
-0.5
-0.5
+1.1
+1.3
carbon source
Glycolic Acid (C)
-0.1
-0.9
-0.2
+1.1
+1.1
stress
Fusidic 0.016 mg/ml
+0.2
+0.2
-1.0
+0.5
+1.4
nitrogen source
L-Alanine (N)
-0.4
-0.3
-0.1
+1.2
+1.4
stress
Benzalkonium Chloride 0.002 mg/ml
+0.1
-0.3
-0.6
+1.4
+1.8
stress
methylglyoxal 0.0016 vol%
-0.4
-0.4
+0.0
+1.5
+1.6
stress
Def Chloride 400 mM
-0.0
-0.5
-0.7
+1.8
+1.9
stress
Def 2-Furfuraldehyde 0.032 vol%
+0.3
-1.0
-1.3
+2.0
+2.5
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.1
-0.6
+0.1
+1.5
+1.5
stress
Paraquat dichloride 0.015 mg/ml
+0.2
+0.1
-0.4
+1.7
+1.2
stress
Cephalothin 0.04 mg/ml
+0.4
+0.5
-0.5
+1.2
+1.7
stress
Paraquat dichloride 0.015 mg/ml
+0.2
+0.1
+0.4
+1.3
+1.3
stress
Phosphomycin 0.012 mg/ml
-0.2
-0.5
-0.4
+3.4
+2.6
stress
Furfuryl Alcohol 0.05 vol%
-0.2
-0.6
+0.4
+3.0
+2.8
stress
Phosphomycin 0.012 mg/ml
+0.0
-0.4
-0.3
+3.3
+3.0
carbon source
L-tyrosine (C)
+0.2
-0.9
-2.3
+6.0
+6.1
carbon source
L-tyrosine (C)
+0.5
+0.3
-0.4
+6.4
+6.3
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