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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2753 and Psest_2754 are separated by 130 nucleotides
Psest_2754 and Psest_2755 are separated by 459 nucleotides
Psest_2755 and Psest_2756 are separated by 93 nucleotides
Psest_2756 and Psest_2757 are separated by 138 nucleotides
Psest_2753: Psest_2753 - Uncharacterized protein conserved in bacteria, at 2,942,771 to 2,943,019
_2753
Psest_2754: Psest_2754 - Sterol desaturase, at 2,943,150 to 2,944,154
_2754
Psest_2755: Psest_2755 - Gluconolactonase, at 2,944,614 to 2,945,705
_2755
Psest_2756: Psest_2756 - hypothetical protein, at 2,945,799 to 2,945,921
_2756
Psest_2757: Psest_2757 - hypothetical protein, at 2,946,060 to 2,946,209
_2757
Group
Condition
Psest
_2753
Psest
_2754
Psest
_2755
Psest
_2756
Psest
_2757
stress
Carbenicillin 0.008 mg/ml
-0.4
-0.5
+0.2
-2.7
-1.8
stress
Phosphomycin 0.012 mg/ml
-0.3
-0.3
-0.0
-2.5
-1.1
stress
Doxycycline hyclate 0.0002 mg/ml
-0.0
-0.4
+0.2
-1.5
-2.3
nitrogen source
L-Isoleucine (N)
+0.4
-0.2
-0.0
-1.4
-2.7
nutrient
L-tyrosine
-0.0
-0.0
+0.1
-2.1
-1.3
stress
nitrite 2.5 mM
+0.2
+0.1
+0.2
-1.5
-2.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-0.3
+0.3
+0.0
-1.3
-1.9
anaerobic
Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten
-0.1
+0.3
-0.2
-0.7
-2.2
stress
2-Furfuraldehyde 0.05 vol%
+0.2
+0.1
+0.3
-2.3
-1.2
stress
Spectinomycin 0.00625 mg/ml
-0.5
+0.0
+0.2
-1.7
-0.9
stress
Benzethonium chloride 0.01 mM
-0.5
+0.4
-0.3
-1.0
-1.3
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.0
-0.7
+0.5
-2.5
+0.2
nitrogen source
Putrescine (N)
-0.7
-0.2
+0.3
-0.4
-1.3
RCH2 grown on a colony of Serratia
-0.2
+0.1
-0.3
-2.6
+0.7
RCH2 grown on a colony of ecoli
-0.3
+0.1
-0.1
+1.1
-2.1
stress
Nalidixic 0.00390625 mg/ml
-0.8
-0.3
+0.1
+1.4
-1.4
stress
Chlorate 75 mM
+0.6
-0.4
+0.4
-1.5
+0.0
nutrient
L-tyrosine
+0.2
+0.1
-0.0
+0.8
-1.8
RCH2 grown on a colony of 8R2A
+0.5
-0.1
-0.0
+0.9
-1.8
carbon source
Glycerol (C)
+0.0
-0.2
+0.1
+1.1
-1.5
stress
perchlorate 25 mM
+0.2
-0.2
-0.3
+1.0
-1.1
stress
Cephalothin 0.04 mg/ml
+1.0
+0.3
+0.1
-1.9
+1.2
stress
5-Hydroxymethylfurfural 5 mM
-0.4
+0.0
+0.3
-0.7
+1.6
stress
acetate 80 mM
-0.4
-0.3
-0.3
+0.6
+1.3
stress
Def Carbenicillin 0.008 mg/ml
+1.2
-0.2
-0.1
-1.2
+1.4
stress
Lactate-nitrate; anaerobic; nickel stress sample3
+0.9
+0.4
+0.3
-1.0
+0.5
stress
Carbenicillin 0.008 mg/ml
-0.3
-0.6
+0.1
+0.9
+1.0
stress
L-Lysine 200 mM
+0.2
-0.5
-0.2
+0.8
+1.2
stress
Cobalt chloride 0.07 mM
-0.0
-0.1
+0.4
+0.9
+1.5
RCH2 grown on a colony of ecoli
+0.1
-0.0
-0.1
-0.3
+3.1
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