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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2747 and Psest_2748 are separated by 69 nucleotides
Psest_2748 and Psest_2749 overlap by 4 nucleotides
Psest_2749 and Psest_2750 are separated by 54 nucleotides
Psest_2750 and Psest_2751 are separated by 72 nucleotides
Psest_2747: Psest_2747 - Putative NADPH-quinone reductase (modulator of drug activity B), at 2,938,324 to 2,939,106
_2747
Psest_2748: Psest_2748 - Transcriptional regulator, at 2,939,176 to 2,940,081
_2748
Psest_2749: Psest_2749 - Predicted transcriptional regulators, at 2,940,078 to 2,940,461
_2749
Psest_2750: Psest_2750 - Nucleoside-diphosphate-sugar epimerases, at 2,940,516 to 2,941,607
_2750
Psest_2751: Psest_2751 - Predicted rRNA methylase (SpoU class), at 2,941,680 to 2,942,147
_2751
Group
Condition
Psest
_2747
Psest
_2748
Psest
_2749
Psest
_2750
Psest
_2751
stress
perchlorate 12.5 mM
-0.0
-2.8
-0.1
-0.4
-0.0
stress
Def Chloride 400 mM
-0.2
-1.1
-0.4
-0.7
+0.2
temperature
LB 26C sample1
-0.2
-0.9
-0.6
-0.0
-0.3
carbon source
propionate (C)
-0.3
-1.3
-0.1
-0.3
+0.0
nitrogen source
L-Citrulline (N)
-0.3
-0.9
-0.8
+0.0
+0.1
stress
Vancomycin 0.016 mg/ml
-0.1
-1.3
+0.2
-0.6
-0.1
RCH2 grown on a colony of Serratia
-0.3
-1.2
+0.3
+0.0
-0.6
stress
5-Hydroxymethylfurfural 5 mM
-0.3
-1.1
-0.5
+0.2
+0.2
stress
L-Lysine 200 mM
+0.4
-2.1
+0.0
+0.1
+0.2
RCH2 grown on a colony of N2F3
+0.1
-0.8
-0.3
+0.4
-0.6
nutrient
L-tyrosine
+0.5
-1.1
+0.3
-0.5
-0.0
stress
Choline chloride 90 mM
+0.5
-1.6
+0.1
-0.0
+0.3
RCH2 grown on a colony of N2A2
+0.2
-1.4
+0.4
-0.1
+0.2
stress
Chlorate 75 mM
+0.0
-0.7
-0.6
+0.4
+0.4
stress
nitrate 200 mM
-0.4
-0.6
-0.0
+0.9
-0.1
stress
Benzethonium chloride 0.0125 mM
+0.3
-1.0
+0.2
+0.4
-0.1
stress
Benzethonium chloride 0.0125 mM
+0.2
-1.0
+0.2
+0.6
-0.0
stress
Nickel (II) chloride 0.9 mM
+0.5
-0.9
-0.2
+0.1
+0.4
nutrient
L-tyrosine
+0.7
-0.1
+0.3
-1.0
+0.3
stress
syringaldehyde 4 mM
+0.5
-1.0
+0.1
+0.5
+0.3
stress
A22 0.002 mg/ml
-0.2
+1.2
-0.5
+0.1
-0.1
stress
Cobalt chloride 0.07 mM
+0.6
-0.8
+0.4
+0.2
+0.2
stress
Benzethonium chloride 0.01 mM
+0.4
+0.2
-0.6
+0.2
+0.6
RCH2 grown on a colony of 8R2A
-0.4
+1.5
+0.5
-0.2
-0.5
stress
nitrate 200 mM
-0.2
-0.6
+0.7
+0.7
+0.3
stress
Furfuryl Alcohol 0.05 vol%
+0.4
-0.4
+0.0
+0.8
+0.3
stress
Cephalothin 0.04 mg/ml
+0.3
+1.2
+0.2
+0.3
-0.5
stress
Def Cephalothin 0.04 mg/ml
-0.4
+1.6
+0.3
+0.4
-0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-0.2
+2.7
+0.1
-0.2
-0.3
nitrogen source
nitrite (N)
+0.1
+0.8
+0.6
+0.8
+0.4
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