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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2733 and Psest_2735 are separated by 600 nucleotides
Psest_2735 and Psest_2736 are separated by 179 nucleotides
Psest_2736 and Psest_2737 are separated by 141 nucleotides
Psest_2737 and Psest_2738 are separated by 108 nucleotides
Psest_2733: Psest_2733 - Uncharacterized protein conserved in bacteria (DUF2188)., at 2,925,152 to 2,925,376
_2733
Psest_2735: Psest_2735 - hypothetical protein, at 2,925,977 to 2,926,651
_2735
Psest_2736: Psest_2736 - Transposase and inactivated derivatives, at 2,926,831 to 2,927,361
_2736
Psest_2737: Psest_2737 - Restriction endonuclease, at 2,927,503 to 2,928,399
_2737
Psest_2738: Psest_2738 - hypothetical protein, at 2,928,508 to 2,929,200
_2738
Group
Condition
Psest
_2733
Psest
_2735
Psest
_2736
Psest
_2737
Psest
_2738
stress
Nalidixic 0.00390625 mg/ml
-0.1
+0.2
-2.2
-0.2
+0.1
stress
Def Carbenicillin 0.02 mg/ml
+0.1
-0.3
-0.6
-0.6
-0.2
anaerobic
Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten
-0.4
+0.2
-1.3
-0.1
+0.1
stress
Lactate-nitrate; anaerobic; dichromate stress sample3
-0.1
+0.2
-0.9
-0.3
-0.3
stress
Nickel (II) chloride 0.8 mM
-0.3
+0.3
-0.8
-0.3
-0.2
metal limitation
Lactate-nitrite with YE; anaerobic; with copper; sample3
-0.3
-0.1
-0.6
+0.4
-0.4
radiation
Ionizing radiation, 319.06 Gy,
-0.9
-0.2
-0.1
-0.1
+0.4
stress
Bacitracin 0.25 mg/ml
-0.6
+0.4
-0.6
+0.1
+0.2
stress
Thallium(I) acetate 0.09 mg/ml
-0.9
+0.3
+0.4
+0.1
-0.4
stress
2-Furfuraldehyde 0.05 vol%
+0.0
+0.2
-0.3
+0.3
-0.8
stress
L-Lysine 200 mM
+0.6
-0.4
+0.2
-0.2
-0.5
RCH2 grown on a colony of N2F3
+0.3
+0.0
-1.0
-0.0
+0.4
RCH2 grown on a colony of N2F3
-0.8
+0.3
-0.6
+0.4
+0.3
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.5
+0.3
-0.9
-0.3
+0.1
stress
nitrate 250 mM
+0.0
-0.2
+1.0
-1.0
-0.2
stress
Lactate-nitrate; anaerobic sample3
+0.5
-0.1
-0.4
+0.3
-0.4
carbon source
propionate (C)
+0.3
+0.6
-0.7
-0.3
+0.2
nitrogen source
L-Glutamic (N)
-0.2
+0.2
+0.9
-0.3
-0.3
stress
Fusidic 0.016 mg/ml
+0.8
-0.2
+0.5
-0.6
-0.2
nitrogen source
Putrescine (N)
+0.9
-0.1
-0.5
+0.4
-0.2
stress
Cobalt chloride 0.07 mM
+0.4
+0.3
-0.9
+0.0
+0.6
stress
nitrite 2.5 mM
-0.4
-0.0
+1.0
-0.1
+0.4
carbon source
L-tyrosine (C)
-0.2
-0.2
+0.7
+0.5
+0.3
stress
Benzethonium chloride 0.0125 mM
-0.4
+0.3
+0.8
+0.1
+0.2
stress
Def 2-Furfuraldehyde 0.032 vol%
+1.1
+0.4
-0.5
-0.0
+0.3
stress
Choline chloride 90 mM
+0.6
+0.4
-0.4
+0.1
+0.5
stress
Cephalothin 0.04 mg/ml
+1.4
-0.2
+0.4
-0.5
+0.1
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.8
-0.1
+0.8
-0.5
+0.3
RCH2 grown on a colony of N2A2
+0.4
-0.0
+0.6
+0.5
+0.4
nitrogen source
nitrite (N)
+1.1
+0.1
+0.7
-0.0
+0.2
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