Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2719 and Psest_2720 are separated by 141 nucleotidesPsest_2720 and Psest_2721 are separated by 127 nucleotidesPsest_2721 and Psest_2722 are separated by 205 nucleotidesPsest_2722 and Psest_2723 are separated by 153 nucleotides Psest_2719: Psest_2719 - acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family, at 2,907,730 to 2,908,950 _2719 Psest_2720: Psest_2720 - Enoyl-CoA hydratase/carnithine racemase, at 2,909,092 to 2,909,781 _2720 Psest_2721: Psest_2721 - HD-GYP domain, at 2,909,909 to 2,911,198 _2721 Psest_2722: Psest_2722 - tRNA_Ser_GGA, at 2,911,404 to 2,911,493 _2722 Psest_2723: Psest_2723 - Uncharacterized conserved protein, at 2,911,647 to 2,912,072 _2723
Group Condition Psest_2719 Psest_2720 Psest_2721 Psest_2722 Psest_2723
temperature Glucose defined 30C timecourse1 timepoint 3 -4.8 -0.2 -0.0 N.D. -0.1
temperature LB 30C timecourse1 timepoint 3 -2.6 -0.2 -0.2 N.D. -0.2
temperature LB 30C timecourse1 timepoint 2 -2.5 -0.2 -0.2 N.D. -0.2
temperature Glucose defined 30C timecourse1 timepoint 2 -3.0 -0.2 +0.1 N.D. -0.1
carbon source Glucose defined media -2.6 -0.4 +0.0 N.D. -0.1
nitrogen source L-Proline (N) -2.4 -0.3 +0.1 N.D. -0.3
carbon source Glucose defined media -2.7 -0.3 +0.0 N.D. +0.0
stress Def Vancomycin 0.008 mg/ml -2.7 -0.2 +0.2 N.D. -0.1
temperature Glucose defined media 26C sample1 -2.6 -0.1 +0.2 N.D. -0.0
temperature Glucose defined 30C timecourse1 timepoint 1 -2.4 -0.2 +0.1 N.D. -0.0
temperature LB 30C timecourse2 timepoint 2 -2.8 +0.1 +0.0 N.D. +0.2
carbon source RCH2 defined media -2.3 -0.0 +0.3 N.D. -0.0
stress Gentamicin 0.0016 mg/ml -2.6 +0.3 -0.2 N.D. +0.4
stress Def Neomycin 0.0002 mg/ml -2.0 -0.4 +0.3 N.D. +0.2
carbon source L-tyrosine (C) +0.4 -2.7 +0.3 N.D. +0.1
stress Def Dimethyl Sulfoxide 5 vol% -1.9 -0.4 +0.2 N.D. +0.3
stress Def Lomefloxacin 0.00004 mM -2.3 +0.4 +0.2 N.D. +0.1
carbon source butyrate (C) -3.0 +0.8 +0.3 N.D. +0.4
stress 5-Hydroxymethylfurfural 5 mM -1.7 +0.6 +0.0 N.D. -0.2
carbon source L-Lactate (C) -1.7 +0.3 -0.1 N.D. +0.6
RCH2 grown on a colony of ecoli -1.6 +0.7 +0.2 N.D. +0.5
stress Nalidixic 0.00390625 mg/ml +1.5 -0.8 -0.2 N.D. -0.6
stress Neomycin 0.004 mg/ml +1.5 -1.0 +0.2 N.D. +0.1
stress Chlorate 75 mM +2.7 -0.5 -0.3 N.D. -0.9
carbon source butyrate (C) -0.7 +1.2 +0.3 N.D. +0.4
carbon source propionate (C) +2.0 -0.0 +0.4 N.D. -0.4
carbon source propionate (C) +1.9 +0.4 +0.1 N.D. -0.2
stress nitrate 200 mM +1.0 +0.5 -0.1 N.D. +0.9
stress Cephalothin 0.04 mg/ml +2.1 +0.1 +0.0 N.D. +0.4
stress Def Benzalkonium Chloride 0.002 mg/ml +1.3 +1.1 +0.4 N.D. +0.4
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