Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_2692 and Psest_2693 are separated by 71 nucleotidesPsest_2693 and Psest_2694 are separated by 15 nucleotidesPsest_2694 and Psest_2695 are separated by 35 nucleotidesPsest_2695 and Psest_2696 are separated by 109 nucleotides Psest_2692: Psest_2692 - catechol 1,2-dioxygenase, proteobacterial, at 2,881,633 to 2,882,574 _2692 Psest_2693: Psest_2693 - muconolactone delta-isomerase, at 2,882,646 to 2,882,936 _2693 Psest_2694: Psest_2694 - muconate and chloromuconate cycloisomerases, at 2,882,952 to 2,884,073 _2694 Psest_2695: Psest_2695 - Sugar phosphate permease, at 2,884,109 to 2,885,452 _2695 Psest_2696: Psest_2696 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,885,562 to 2,886,341 _2696
Group Condition Psest_2692 Psest_2693 Psest_2694 Psest_2695 Psest_2696
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.0 -0.9 N.D. -0.3 N.D.
stress Furfuryl Alcohol 0.05 vol% +0.0 -1.2 N.D. +0.1 N.D.
carbon source L-tyrosine (C) -0.3 -0.6 N.D. -0.2 N.D.
temperature LB 26C sample1 -0.2 -0.6 N.D. -0.2 N.D.
nitrogen source nitrite (N) +0.3 -1.0 N.D. -0.3 N.D.
stress Polymyxin B sulfate 0.0001 mg/ml -0.7 +0.1 N.D. -0.3 N.D.
stress Chlorate 75 mM -0.4 -0.6 N.D. +0.2 N.D.
stress L-Lysine 200 mM -0.3 -0.7 N.D. +0.2 N.D.
carbon source Tween 20 (C) +0.2 -0.8 N.D. +0.1 N.D.
RCH2 grown on a colony of ecoli +0.1 -1.0 N.D. +0.5 N.D.
stress Bacitracin 0.25 mg/ml +0.1 -0.7 N.D. +0.2 N.D.
stress nitrate 250 mM +0.4 -0.9 N.D. +0.1 N.D.
nitrogen source L-Citrulline (N) +0.4 -0.6 N.D. -0.1 N.D.
stress Lactate-nitrate; anaerobic; copper stress sample3 -0.4 +0.5 N.D. -0.2 N.D.
stress Carbenicillin 0.008 mg/ml -0.4 +0.7 N.D. -0.3 N.D.
stress Lactate-nitrate; anaerobic; copper stress sample1 -0.4 +0.7 N.D. -0.3 N.D.
stress Def Neomycin 0.0008 mg/ml +0.4 -0.5 N.D. +0.1 N.D.
RCH2 grown on a colony of Serratia -0.2 +0.6 N.D. -0.4 N.D.
RCH2 grown on a colony of N2C3 +0.2 +0.5 N.D. -0.5 N.D.
stress Lactate-nitrate; anaerobic; cobalt stress sample1 -0.4 +0.5 N.D. +0.3 N.D.
nutrient L-Histidine -0.3 +0.6 N.D. +0.2 N.D.
nitrogen source L-Isoleucine (N) -0.1 +0.8 N.D. -0.2 N.D.
lb LB -0.2 +0.4 N.D. +0.4 N.D.
stress Choline chloride 90 mM +0.2 +0.7 N.D. +0.1 N.D.
carbon source L-Lactate (C) +0.5 +0.3 N.D. +0.3 N.D.
stress Doxycycline hyclate 0.0002 mg/ml +0.4 +0.5 N.D. +0.2 N.D.
carbon source a-Ketoglutaric (C) +0.2 +0.6 N.D. +0.2 N.D.
stress Fusidic 0.016 mg/ml +0.2 +0.8 N.D. +0.1 N.D.
nitrogen source nitrite (N) +0.5 +0.3 N.D. +0.3 N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml +0.5 +0.3 N.D. +0.3 N.D.
remove
Psest_2692
plot		 remove
Psest_2693
plot		 remove
Psest_2694		 remove
Psest_2695
plot		 remove
Psest_2696
plot