Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2691 and Psest_2692 are separated by 197 nucleotidesPsest_2692 and Psest_2693 are separated by 71 nucleotidesPsest_2693 and Psest_2694 are separated by 15 nucleotidesPsest_2694 and Psest_2695 are separated by 35 nucleotides Psest_2691: Psest_2691 - benzoate transporter, at 2,880,230 to 2,881,435 _2691 Psest_2692: Psest_2692 - catechol 1,2-dioxygenase, proteobacterial, at 2,881,633 to 2,882,574 _2692 Psest_2693: Psest_2693 - muconolactone delta-isomerase, at 2,882,646 to 2,882,936 _2693 Psest_2694: Psest_2694 - muconate and chloromuconate cycloisomerases, at 2,882,952 to 2,884,073 _2694 Psest_2695: Psest_2695 - Sugar phosphate permease, at 2,884,109 to 2,885,452 _2695
Group Condition Psest_2691 Psest_2692 Psest_2693 Psest_2694 Psest_2695
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.1 +0.0 -0.9 N.D. -0.3
temperature LB 26C sample1 -0.1 -0.2 -0.6 N.D. -0.2
stress D-Cycloserine 0.032 mg/ml -0.2 +0.1 -0.8 N.D. -0.1
stress Furfuryl Alcohol 0.05 vol% +0.1 +0.0 -1.2 N.D. +0.1
nitrogen source nitrite (N) -0.1 +0.3 -1.0 N.D. -0.3
carbon source L-tyrosine (C) +0.1 -0.3 -0.6 N.D. -0.2
stress Chlorate 75 mM -0.1 -0.4 -0.6 N.D. +0.2
stress Polymyxin B sulfate 0.0001 mg/ml -0.1 -0.7 +0.1 N.D. -0.3
stress nitrate 250 mM -0.5 +0.4 -0.9 N.D. +0.1
stress L-Lysine 200 mM +0.0 -0.3 -0.7 N.D. +0.2
RCH2 grown on a colony of ecoli +0.0 +0.1 -1.0 N.D. +0.5
carbon source Tween 20 (C) +0.1 +0.2 -0.8 N.D. +0.1
nitrogen source L-Citrulline (N) -0.1 +0.4 -0.6 N.D. -0.1
stress Bacitracin 0.25 mg/ml +0.1 +0.1 -0.7 N.D. +0.2
stress Lactate-nitrate; anaerobic; copper stress sample3 -0.2 -0.4 +0.5 N.D. -0.2
stress Carbenicillin 0.008 mg/ml -0.1 -0.4 +0.7 N.D. -0.3
stress Lactate-nitrate; anaerobic; copper stress sample1 -0.1 -0.4 +0.7 N.D. -0.3
stress Lactate-nitrate; anaerobic; cobalt stress sample1 -0.3 -0.4 +0.5 N.D. +0.3
RCH2 grown on a colony of N2C3 +0.0 +0.2 +0.5 N.D. -0.5
RCH2 grown on a colony of Serratia +0.3 -0.2 +0.6 N.D. -0.4
nitrogen source L-Isoleucine (N) -0.1 -0.1 +0.8 N.D. -0.2
nutrient L-Histidine +0.0 -0.3 +0.6 N.D. +0.2
stress Nalidixic 0.00390625 mg/ml +0.3 +0.3 +0.3 N.D. -0.2
carbon source L-Lactate (C) -0.2 +0.5 +0.3 N.D. +0.3
stress Fusidic 0.016 mg/ml -0.2 +0.2 +0.8 N.D. +0.1
stress Paraquat dichloride 0.015 mg/ml +0.2 -0.1 +0.8 N.D. +0.1
stress Def Benzalkonium Chloride 0.002 mg/ml -0.2 +0.5 +0.3 N.D. +0.3
stress Doxycycline hyclate 0.0002 mg/ml +0.1 +0.4 +0.5 N.D. +0.2
nitrogen source nitrite (N) +0.0 +0.5 +0.3 N.D. +0.3
stress Choline chloride 90 mM +0.2 +0.2 +0.7 N.D. +0.1
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