Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2666 and Psest_2667 are separated by 122 nucleotidesPsest_2667 and Psest_2668 overlap by 4 nucleotidesPsest_2668 and Psest_2669 are separated by 16 nucleotidesPsest_2669 and Psest_2670 are separated by 76 nucleotides Psest_2666: Psest_2666 - Predicted acyl-CoA transferases/carnitine dehydratase, at 2,853,388 to 2,854,593 _2666 Psest_2667: Psest_2667 - Uncharacterized protein involved in propionate catabolism, at 2,854,716 to 2,856,068 _2667 Psest_2668: Psest_2668 - Lactoylglutathione lyase and related lyases, at 2,856,065 to 2,856,568 _2668 Psest_2669: Psest_2669 - Acyl-CoA dehydrogenases, at 2,856,585 to 2,857,748 _2669 Psest_2670: Psest_2670 - Uncharacterized conserved protein, at 2,857,825 to 2,858,646 _2670
Group Condition Psest_2666 Psest_2667 Psest_2668 Psest_2669 Psest_2670
stress sodium fluoride 6.25 mM -0.5 -1.7 -0.8 -0.1 -0.5
stress 5-Hydroxymethylfurfural 5 mM -0.6 -0.9 -0.5 -0.7 -0.7
RCH2 grown on a colony of ecoli -0.1 -0.9 -0.9 +0.3 -1.3
stress Vanillin 2 mM -0.8 -0.6 -0.2 -0.1 -1.1
RCH2 grown on a colony of Serratia -0.2 -0.8 -1.1 +0.1 -0.7
nitrogen source nitrite (N) -0.9 -1.3 -0.2 -1.3 +1.0
stress methylglyoxal 0.0016 vol% -0.3 -0.8 +0.0 -0.0 -1.1
stress Def Lomefloxacin 0.00004 mM +0.3 -0.9 -0.8 -0.2 -0.4
stress Lactate-nitrate; anaerobic; dichromate stress sample3 +0.1 -1.0 -1.1 +0.2 +0.3
stress Def Vancomycin 0.016 mg/ml +0.1 -1.4 -0.4 +0.1 +0.2
stress Def Dimethyl Sulfoxide 5 vol% +0.2 -0.0 -1.4 -0.3 +0.3
carbon source D-Gluconic Acid (C) -0.3 +0.5 -0.3 -0.2 -1.0
nitrogen source L-Isoleucine (N) -1.1 +0.2 -0.4 -0.6 +0.6
stress Def Chlorate 40 mM +0.0 -1.3 +0.6 +0.2 -0.8
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.4 +0.3 -0.9 +0.3 -0.7
RCH2 grown on a colony of N2F3 +0.4 -0.4 -0.7 +0.3 +0.6
stress nitrite 2.5 mM +0.1 -1.1 -0.1 -0.0 +1.3
carbon source propionate (C) +0.4 +0.8 -0.9 +0.5 -0.4
temperature LB 30C timecourse2 timepoint 2 +0.4 -0.5 +0.7 +0.4 +0.3
stress Def Carbenicillin 0.008 mg/ml +0.9 -0.4 +0.6 -0.3 +0.6
stress A22 0.002 mg/ml +0.3 -0.3 +0.1 +0.2 +1.3
temperature LB 30C timecourse2 timepoint 1 +0.4 +0.9 +1.0 +0.1 -0.3
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.3 +0.5 +0.8 -0.1 +0.8
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.5 +0.3 +0.5 -0.1 +0.9
carbon source L-Proline (C) +0.3 +1.0 +0.4 +0.1 +0.5
stress Fusidic 0.016 mg/ml +0.2 +0.1 +0.3 +0.1 +1.6
carbon source L-tyrosine (C) -0.2 -0.0 +1.2 +0.2 +1.2
carbon source L-tyrosine (C) -0.1 +0.6 +1.0 -0.1 +1.0
stress Choline chloride 90 mM +0.2 +0.7 +0.7 +0.8 +0.3
stress Chlorate 75 mM +1.0 +1.3 +1.5 +0.8 -0.4
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