Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 424 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Psest_2666 and Psest_2667 are separated by 122 nucleotides
Psest_2667 and Psest_2668 overlap by 4 nucleotides
Psest_2668 and Psest_2669 are separated by 16 nucleotides
Psest_2669 and Psest_2670 are separated by 76 nucleotides
Psest_2666: Psest_2666 - Predicted acyl-CoA transferases/carnitine dehydratase, at 2,853,388 to 2,854,593
_2666
Psest_2667: Psest_2667 - Uncharacterized protein involved in propionate catabolism, at 2,854,716 to 2,856,068
_2667
Psest_2668: Psest_2668 - Lactoylglutathione lyase and related lyases, at 2,856,065 to 2,856,568
_2668
Psest_2669: Psest_2669 - Acyl-CoA dehydrogenases, at 2,856,585 to 2,857,748
_2669
Psest_2670: Psest_2670 - Uncharacterized conserved protein, at 2,857,825 to 2,858,646
_2670
Group
Condition
Psest
_2666
Psest
_2667
Psest
_2668
Psest
_2669
Psest
_2670
stress
sodium fluoride 6.25 mM
-0.5
-1.7
-0.8
-0.1
-0.5
stress
5-Hydroxymethylfurfural 5 mM
-0.6
-0.9
-0.5
-0.7
-0.7
RCH2 grown on a colony of ecoli
-0.1
-0.9
-0.9
+0.3
-1.3
stress
Vanillin 2 mM
-0.8
-0.6
-0.2
-0.1
-1.1
RCH2 grown on a colony of Serratia
-0.2
-0.8
-1.1
+0.1
-0.7
nitrogen source
nitrite (N)
-0.9
-1.3
-0.2
-1.3
+1.0
stress
methylglyoxal 0.0016 vol%
-0.3
-0.8
+0.0
-0.0
-1.1
stress
Def Lomefloxacin 0.00004 mM
+0.3
-0.9
-0.8
-0.2
-0.4
stress
Lactate-nitrate; anaerobic; dichromate stress sample3
+0.1
-1.0
-1.1
+0.2
+0.3
stress
Def Vancomycin 0.016 mg/ml
+0.1
-1.4
-0.4
+0.1
+0.2
stress
Def Dimethyl Sulfoxide 5 vol%
+0.2
-0.0
-1.4
-0.3
+0.3
carbon source
D-Gluconic Acid (C)
-0.3
+0.5
-0.3
-0.2
-1.0
nitrogen source
L-Isoleucine (N)
-1.1
+0.2
-0.4
-0.6
+0.6
stress
Def Chlorate 40 mM
+0.0
-1.3
+0.6
+0.2
-0.8
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.4
+0.3
-0.9
+0.3
-0.7
RCH2 grown on a colony of N2F3
+0.4
-0.4
-0.7
+0.3
+0.6
stress
nitrite 2.5 mM
+0.1
-1.1
-0.1
-0.0
+1.3
carbon source
propionate (C)
+0.4
+0.8
-0.9
+0.5
-0.4
temperature
LB 30C timecourse2 timepoint 2
+0.4
-0.5
+0.7
+0.4
+0.3
stress
Def Carbenicillin 0.008 mg/ml
+0.9
-0.4
+0.6
-0.3
+0.6
stress
A22 0.002 mg/ml
+0.3
-0.3
+0.1
+0.2
+1.3
temperature
LB 30C timecourse2 timepoint 1
+0.4
+0.9
+1.0
+0.1
-0.3
stress
Def Polymyxin B sulfate 0.0001 mg/ml
+0.3
+0.5
+0.8
-0.1
+0.8
stress
Def Polymyxin B sulfate 0.00008 mg/ml
+0.5
+0.3
+0.5
-0.1
+0.9
carbon source
L-Proline (C)
+0.3
+1.0
+0.4
+0.1
+0.5
stress
Fusidic 0.016 mg/ml
+0.2
+0.1
+0.3
+0.1
+1.6
carbon source
L-tyrosine (C)
-0.2
-0.0
+1.2
+0.2
+1.2
carbon source
L-tyrosine (C)
-0.1
+0.6
+1.0
-0.1
+1.0
stress
Choline chloride 90 mM
+0.2
+0.7
+0.7
+0.8
+0.3
stress
Chlorate 75 mM
+1.0
+1.3
+1.5
+0.8
-0.4
remove
Psest_2666
plot
remove
Psest_2667
plot
remove
Psest_2668
remove
Psest_2669
plot
remove
Psest_2670
plot