Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0260 and Psest_0261 are separated by 112 nucleotidesPsest_0261 and Psest_0262 are separated by 83 nucleotidesPsest_0262 and Psest_0263 are separated by 185 nucleotidesPsest_0263 and Psest_0264 are separated by 120 nucleotides Psest_0260: Psest_0260 - Cell division protein, at 274,524 to 275,543 _0260 Psest_0261: Psest_0261 - alternative sigma factor RpoH, at 275,656 to 276,510 _0261 Psest_0262: Psest_0262 - PAS domain S-box, at 276,594 to 279,164 _0262 Psest_0263: Psest_0263 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 279,350 to 281,278 _0263 Psest_0264: Psest_0264 - monofunctional biosynthetic peptidoglycan transglycosylase, at 281,399 to 282,127 _0264
Group Condition Psest_0260 Psest_0261 Psest_0262 Psest_0263 Psest_0264
stress Def Carbenicillin 0.02 mg/ml -3.9 N.D. -0.1 -0.8 +0.1
stress Furfuryl Alcohol 0.05 vol% -3.3 N.D. +0.1 -0.6 -0.4
stress Gentamicin 0.0016 mg/ml -4.2 N.D. -0.4 -0.1 +0.7
carbon source L-tyrosine (C) -3.6 N.D. -0.4 -0.1 +0.3
stress Choline Lysine 20 mM -3.4 N.D. -0.1 +0.1 -0.2
stress Carbenicillin 0.0065 mg/ml -3.4 N.D. +0.1 +0.3 -0.4
lb LB -3.4 N.D. -0.0 +0.0 +0.1
stress Def Benzethonium chloride 0.008 mM -3.2 N.D. -0.1 -0.6 +0.6
nutrient Min media with glucose -2.7 N.D. -0.1 -0.1 -0.3
stress Chlorate 75 mM -1.6 N.D. -0.4 -0.4 -0.6
stress Vancomycin 0.016 mg/ml -3.1 N.D. -0.0 +0.2 +0.0
stress Nickel (II) chloride 0.9 mM -2.7 N.D. +0.1 -0.0 -0.1
stress Choline chloride 90 mM -2.5 N.D. +0.0 -0.2 +0.1
stress Cisplatin 0.003 mg/ml -2.1 N.D. +0.1 -0.3 -0.3
nutrient L-tyrosine -2.2 N.D. -0.0 -0.0 -0.1
stress Cobalt chloride 0.05 mM -2.4 N.D. -0.1 +0.1 +0.1
carbon source RCH2 defined media -1.0 N.D. -0.4 -1.2 +0.4
stress nitrate 250 mM -1.2 N.D. -0.6 -0.6 +0.5
stress D-Cycloserine 0.032 mg/ml -1.9 N.D. +0.2 +0.3 -0.3
stress Cephalothin 0.04 mg/ml -1.7 N.D. -0.4 -0.3 +0.7
stress Carbenicillin 0.008 mg/ml -1.7 N.D. +0.3 +0.2 -0.4
temperature LB 30C timecourse1 timepoint 3 -0.9 N.D. -0.4 -1.0 +0.7
temperature LB 30C timecourse2 timepoint 1 -1.8 N.D. -0.2 -0.4 +0.9
stress Carbenicillin 0.008 mg/ml -1.6 N.D. +0.2 +0.3 -0.4
nitrogen source L-Alanine (N) -1.9 N.D. +0.2 +0.2 +0.6
carbon source butyrate (C) +0.7 N.D. -2.3 -0.2 +1.3
stress Fusidic 0.016 mg/ml -0.5 N.D. -0.4 -0.5 +1.2
stress Def Benzalkonium Chloride 0.002 mg/ml +1.0 N.D. -0.3 -0.2 +1.2
carbon source L-tyrosine (C) +3.6 N.D. -0.3 +0.1 -0.4
RCH2 grown on a colony of N2C3 +3.1 N.D. +0.1 +0.6 -0.1
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