Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2624 and Psest_2625 are separated by 15 nucleotidesPsest_2625 and Psest_2626 are separated by 54 nucleotidesPsest_2626 and Psest_2627 are separated by 12 nucleotidesPsest_2627 and Psest_2628 are separated by 12 nucleotides Psest_2624: Psest_2624 - hypothetical protein, at 2,806,581 to 2,806,850 _2624 Psest_2625: Psest_2625 - Flp pilus assembly protein, secretin CpaC, at 2,806,866 to 2,808,380 _2625 Psest_2626: Psest_2626 - Flp pilus assembly protein CpaB, at 2,808,435 to 2,809,244 _2626 Psest_2627: Psest_2627 - hypothetical protein, at 2,809,257 to 2,810,576 _2627 Psest_2628: Psest_2628 - Flp pilus assembly protein, protease CpaA, at 2,810,589 to 2,811,095 _2628
Group Condition Psest_2624 Psest_2625 Psest_2626 Psest_2627 Psest_2628
stress 5-Hydroxymethylfurfural 5 mM -0.4 -0.5 -0.6 -0.2 -0.7
RCH2 grown on a colony of 8R2A -0.3 -0.2 -2.0 +0.0 +0.0
nitrogen source nitrite (N) -0.9 -0.4 +0.5 -0.7 -0.8
carbon source D-Gluconic Acid (C) -1.3 +0.1 -0.5 -0.4 +0.1
stress Nalidixic 0.00390625 mg/ml +0.4 -0.5 -1.0 +0.1 -1.1
RCH2 grown on a colony of N2F3 +0.2 -0.3 -1.0 -0.3 -0.6
stress Paraquat dichloride 0.015 mg/ml -0.8 +0.1 +0.3 -0.7 -0.7
stress Paraquat dichloride 0.015 mg/ml -1.5 -0.3 +0.7 -0.5 -0.1
stress Def 2-Furfuraldehyde 0.032 vol% -0.7 -0.6 +0.4 -0.7 +0.3
stress nitrate 250 mM -3.3 +0.1 +0.9 -0.1 +1.1
RCH2 grown on a colony of ecoli -0.2 +0.2 -1.1 +0.5 -0.5
RCH2 grown on a colony of N2F3 -1.2 -0.2 +0.8 +0.4 -1.0
vitamin No vitamins t2 -0.9 -0.1 +0.6 +0.1 -0.8
stress Def Benzalkonium Chloride 0.002 mg/ml -0.6 -0.4 +0.8 -0.4 -0.1
carbon source propionate (C) -0.2 +0.1 -0.5 +0.8 -0.7
stress Lactate-nitrate; anaerobic; nickel stress sample2 +1.2 -0.1 -0.8 -0.0 -0.6
stress Spectinomycin 0.00625 mg/ml -0.4 -0.3 -0.4 -0.2 +1.4
stress Benzalkonium Chloride 0.002 mg/ml -1.0 -0.0 +0.7 -0.1 +0.7
stress Lactate-nitrate; anaerobic; dichromate stress sample1 +0.5 -0.1 -1.0 +0.5 +0.7
RCH2 grown on a colony of Serratia +1.5 -0.4 -0.8 +0.0 +0.8
stress Gentamicin 0.0016 mg/ml -0.7 +0.1 +0.7 -0.1 +1.2
carbon source L-tyrosine (C) -0.2 +0.4 +1.1 +0.5 -0.6
stress Fusidic 0.016 mg/ml -0.2 +0.1 +1.3 -0.5 +0.5
RCH2 grown on a colony of Serratia +0.9 -0.2 -0.4 +0.2 +1.1
metal limitation Lactate-nitrite with YE; anaerobic; sample3 +0.6 +0.2 -0.5 +0.2 +1.1
stress Chlorate 75 mM +0.1 +0.3 +0.8 -0.5 +1.3
temperature LB 30C timecourse1 timepoint 3 +1.0 +0.4 +0.1 -0.4 +1.0
stress Def Nalidixic 0.001 mg/ml +0.6 +0.3 +0.4 +0.4 +0.8
stress Def Thallium(I) acetate 0.125 mg/ml +0.9 +0.3 +0.1 +0.4 +0.8
nitrogen source L-Isoleucine (N) +0.5 +0.5 +1.1 +0.1 +0.9
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