Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2619 and Psest_2620 overlap by 11 nucleotidesPsest_2620 and Psest_2621 overlap by 7 nucleotidesPsest_2621 and Psest_2622 overlap by 1 nucleotidesPsest_2622 and Psest_2623 are separated by 11 nucleotides Psest_2619: Psest_2619 - Flp pilus assembly protein, ATPase CpaF, at 2,801,614 to 2,803,038 _2619 Psest_2620: Psest_2620 - Flp pilus assembly protein, ATPase CpaE, at 2,803,028 to 2,804,257 _2620 Psest_2621: Psest_2621 - TadE-like protein., at 2,804,251 to 2,804,754 _2621 Psest_2622: Psest_2622 - TadE-like protein., at 2,804,754 to 2,805,224 _2622 Psest_2623: Psest_2623 - Flp pilus assembly protein TadG, at 2,805,236 to 2,806,570 _2623
Group Condition Psest_2619 Psest_2620 Psest_2621 Psest_2622 Psest_2623
stress Def Cephalothin 0.08 mg/ml -0.3 -0.1 -1.4 -0.5 -0.4
nitrogen source nitrite (N) -0.0 -0.4 -0.4 -0.9 -0.3
nitrogen source Cytosine (N) -0.3 -0.3 -0.8 -0.2 -0.4
nitrogen source L-Alanine (N) -0.3 -0.2 -0.8 -0.2 -0.5
stress Def A22 0.015 mg/ml -0.2 +0.0 -0.6 -0.8 -0.4
nitrogen source L-Isoleucine (N) -0.4 -0.0 -1.0 +0.3 -0.5
RCH2 grown on a colony of Serratia -0.7 -0.6 +0.5 -1.0 +0.3
stress Furfuryl Alcohol 0.2 vol% +0.1 +0.1 -0.6 -1.0 +0.2
stress Def Carbenicillin 0.008 mg/ml +0.2 +0.2 -1.6 +0.3 -0.2
stress Furfuryl Alcohol 0.05 vol% -0.4 +0.0 -1.2 +0.3 +0.1
RCH2 grown on a colony of Serratia +0.1 +0.3 -0.5 -1.2 +0.1
stress Nalidixic 0.00390625 mg/ml +0.2 +0.4 -1.1 -0.4 +0.2
stress Def Benzalkonium Chloride 0.002 mg/ml -0.0 +0.2 -1.2 +0.7 -0.3
temperature LB 30C timecourse1 timepoint 1 +0.5 -0.2 -0.7 -0.4 +0.4
carbon source propionate (C) -0.6 -0.7 +1.1 -0.3 +0.1
stress Def Carbenicillin 0.02 mg/ml -0.2 +0.3 +0.8 -0.8 -0.4
stress methylglyoxal 0.0016 vol% +0.1 -0.0 -1.0 +0.7 -0.1
stress A22 0.005 mg/ml +0.1 -0.1 +0.7 -0.9 -0.2
RCH2 grown on a colony of N2C3 +0.8 -0.3 -0.8 +0.0 +0.1
RCH2 grown on a colony of ecoli +0.2 +0.2 -0.4 +1.3 -0.2
RCH2 grown on a colony of N2A2 +0.7 +0.3 -0.7 +0.8 +0.3
temperature LB 30C timecourse2 timepoint 2 -0.1 +0.0 +0.2 +1.2 +0.4
stress Lomefloxacin 0.0001 mM +0.2 +0.1 +0.7 +0.7 +0.2
stress Def Chlorate 40 mM +0.4 +0.1 +1.0 +0.4 +0.2
stress Def Thallium(I) acetate 0.125 mg/ml +0.6 +0.1 +0.8 +0.2 +0.4
carbon source L-tyrosine (C) +0.1 -0.3 +0.7 +1.5 +0.2
stress Gentamicin 0.0016 mg/ml +0.5 +0.4 +0.6 +0.3 +0.4
stress Fusidic 0.016 mg/ml +0.6 +0.2 +0.3 +0.9 +0.3
nitrogen source L-Glutamic (N) +0.5 +0.2 +0.5 +0.9 +0.3
stress Chlorate 75 mM +0.5 -0.3 +1.0 +0.7 +0.8
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