Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2601 and Psest_2602 overlap by 32 nucleotidesPsest_2602 and Psest_2603 are separated by 51 nucleotidesPsest_2603 and Psest_2604 are separated by 25 nucleotidesPsest_2604 and Psest_2605 are separated by 57 nucleotides Psest_2601: Psest_2601 - Membrane protein involved in the export of O-antigen and teichoic acid, at 2,782,208 to 2,783,770 _2601 Psest_2602: Psest_2602 - Glycosyltransferases involved in cell wall biogenesis, at 2,783,739 to 2,784,671 _2602 Psest_2603: Psest_2603 - capsular exopolysaccharide family, at 2,784,723 to 2,786,936 _2603 Psest_2604: Psest_2604 - WbqC-like protein family., at 2,786,962 to 2,787,705 _2604 Psest_2605: Psest_2605 - transcriptional activator RfaH, at 2,787,763 to 2,788,272 _2605
Group Condition Psest_2601 Psest_2602 Psest_2603 Psest_2604 Psest_2605
stress Chlorate 75 mM -0.2 -0.3 -0.1 -0.7 -1.2
carbon source L-tyrosine (C) +0.0 -0.8 +0.1 +0.5 -1.3
stress Def Carbenicillin 0.02 mg/ml -0.1 -1.0 -0.3 -0.3 +0.7
RCH2 grown on a colony of ecoli +0.2 +0.5 -0.1 -0.1 -1.4
stress nitrate 200 mM +0.1 +0.2 -0.2 +0.6 -1.5
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.3 +0.7 +0.3 +0.9 -0.9
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.5 -0.2 +0.7 +0.7 +0.3
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.2 -0.1 +0.5 +0.7 +0.9
carbon source L-Glutamine (C) +0.3 -0.0 +0.6 +1.1 +0.5
nitrogen source L-Valine (N) +0.5 +0.1 +0.6 +1.1 +0.0
nitrogen source nitrite (N) +0.5 -0.2 +0.6 +0.9 +0.6
carbon source butyrate (C) +0.5 +0.0 +0.6 +1.0 +0.3
stress Phosphomycin 0.012 mg/ml +0.4 -0.2 +0.5 +0.5 +1.3
nitrogen source nitrite (N) +0.5 +0.2 +0.7 +0.7 +0.5
RCH2 grown on a colony of N2A2 +0.4 -0.0 +0.5 +0.7 +1.0
carbon source D-Fructose (C) +0.6 +0.4 +0.7 +0.3 +0.7
carbon source L-Alanine (C) +0.5 +0.4 +0.6 +0.7 +0.6
nitrogen source L-Citrulline (N) +0.4 +0.5 +0.5 +0.9 +0.6
nitrogen source L-Isoleucine (N) +0.3 +0.2 +0.5 +1.1 +0.8
nitrogen source L-Valine (N) +0.6 +0.6 +0.6 +1.1 +0.1
nitrogen source L-Citrulline (N) +0.5 +0.6 +0.6 +1.1 +0.2
nitrogen source Putrescine (N) +0.3 +0.3 +0.7 +0.8 +1.1
stress Cisplatin 0.003 mg/ml +0.5 +0.7 +0.5 +0.5 +1.0
carbon source L-Alanine (C) +0.7 +0.7 +0.7 +0.9 +0.9
stress A22 0.005 mg/ml +0.7 +0.6 +0.9 +0.9 +1.0
nitrogen source L-Isoleucine (N) +1.1 +1.0 +1.0 +1.4 +1.0
nitrogen source L-Isoleucine (N) +1.2 +1.0 +1.3 +1.7 +1.5
nitrogen source L-Isoleucine (N) +1.1 +0.8 +1.3 +2.2 +2.0
carbon source Ethanol (C) +0.7 +1.8 +1.6 +2.0 +1.9
carbon source Ethanol (C) +0.9 +1.9 +1.7 +1.9 +1.9
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