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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_2601 and Psest_2602 overlap by 32 nucleotides
Psest_2602 and Psest_2603 are separated by 51 nucleotides
Psest_2603 and Psest_2604 are separated by 25 nucleotides
Psest_2604 and Psest_2605 are separated by 57 nucleotides
Psest_2601: Psest_2601 - Membrane protein involved in the export of O-antigen and teichoic acid, at 2,782,208 to 2,783,770
_2601
Psest_2602: Psest_2602 - Glycosyltransferases involved in cell wall biogenesis, at 2,783,739 to 2,784,671
_2602
Psest_2603: Psest_2603 - capsular exopolysaccharide family, at 2,784,723 to 2,786,936
_2603
Psest_2604: Psest_2604 - WbqC-like protein family., at 2,786,962 to 2,787,705
_2604
Psest_2605: Psest_2605 - transcriptional activator RfaH, at 2,787,763 to 2,788,272
_2605
Group
Condition
Psest
_2601
Psest
_2602
Psest
_2603
Psest
_2604
Psest
_2605
stress
Chlorate 75 mM
-0.2
-0.3
-0.1
-0.7
-1.2
carbon source
L-tyrosine (C)
+0.0
-0.8
+0.1
+0.5
-1.3
stress
Def Carbenicillin 0.02 mg/ml
-0.1
-1.0
-0.3
-0.3
+0.7
RCH2 grown on a colony of ecoli
+0.2
+0.5
-0.1
-0.1
-1.4
stress
nitrate 200 mM
+0.1
+0.2
-0.2
+0.6
-1.5
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.3
+0.7
+0.3
+0.9
-0.9
stress
Def Polymyxin B sulfate 0.0001 mg/ml
+0.5
-0.2
+0.7
+0.7
+0.3
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.2
-0.1
+0.5
+0.7
+0.9
carbon source
L-Glutamine (C)
+0.3
-0.0
+0.6
+1.1
+0.5
nitrogen source
L-Valine (N)
+0.5
+0.1
+0.6
+1.1
+0.0
nitrogen source
nitrite (N)
+0.5
-0.2
+0.6
+0.9
+0.6
carbon source
butyrate (C)
+0.5
+0.0
+0.6
+1.0
+0.3
stress
Phosphomycin 0.012 mg/ml
+0.4
-0.2
+0.5
+0.5
+1.3
nitrogen source
nitrite (N)
+0.5
+0.2
+0.7
+0.7
+0.5
RCH2 grown on a colony of N2A2
+0.4
-0.0
+0.5
+0.7
+1.0
carbon source
D-Fructose (C)
+0.6
+0.4
+0.7
+0.3
+0.7
carbon source
L-Alanine (C)
+0.5
+0.4
+0.6
+0.7
+0.6
nitrogen source
L-Citrulline (N)
+0.4
+0.5
+0.5
+0.9
+0.6
nitrogen source
L-Isoleucine (N)
+0.3
+0.2
+0.5
+1.1
+0.8
nitrogen source
L-Valine (N)
+0.6
+0.6
+0.6
+1.1
+0.1
nitrogen source
L-Citrulline (N)
+0.5
+0.6
+0.6
+1.1
+0.2
nitrogen source
Putrescine (N)
+0.3
+0.3
+0.7
+0.8
+1.1
stress
Cisplatin 0.003 mg/ml
+0.5
+0.7
+0.5
+0.5
+1.0
carbon source
L-Alanine (C)
+0.7
+0.7
+0.7
+0.9
+0.9
stress
A22 0.005 mg/ml
+0.7
+0.6
+0.9
+0.9
+1.0
nitrogen source
L-Isoleucine (N)
+1.1
+1.0
+1.0
+1.4
+1.0
nitrogen source
L-Isoleucine (N)
+1.2
+1.0
+1.3
+1.7
+1.5
nitrogen source
L-Isoleucine (N)
+1.1
+0.8
+1.3
+2.2
+2.0
carbon source
Ethanol (C)
+0.7
+1.8
+1.6
+2.0
+1.9
carbon source
Ethanol (C)
+0.9
+1.9
+1.7
+1.9
+1.9
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