Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2594 and Psest_2595 are separated by 5 nucleotidesPsest_2595 and Psest_2596 are separated by 417 nucleotidesPsest_2596 and Psest_2597 are separated by 353 nucleotidesPsest_2597 and Psest_2598 are separated by 169 nucleotides Psest_2594: Psest_2594 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,776,124 to 2,776,870 _2594 Psest_2595: Psest_2595 - tRNA-dihydrouridine synthase, at 2,776,876 to 2,777,847 _2595 Psest_2596: Psest_2596 - hypothetical protein, at 2,778,265 to 2,778,621 _2596 Psest_2597: Psest_2597 - tRNA_Met_CAT, at 2,778,975 to 2,779,051 _2597 Psest_2598: Psest_2598 - tRNA_Met_CAT, at 2,779,221 to 2,779,297 _2598
Group Condition Psest_2594 Psest_2595 Psest_2596 Psest_2597 Psest_2598
stress Nalidixic 0.00390625 mg/ml -1.0 -0.5 -0.9 N.D. N.D.
RCH2 grown on a colony of N2F3 -0.9 +0.4 -0.6 N.D. N.D.
stress 2-Furfuraldehyde 0.05 vol% -1.1 +0.3 +0.2 N.D. N.D.
stress Paraquat dichloride 0.015 mg/ml -1.1 +0.3 +0.2 N.D. N.D.
stress perchlorate 25 mM -1.0 +0.3 +0.2 N.D. N.D.
stress Carbenicillin 0.0065 mg/ml -0.9 -0.1 +0.6 N.D. N.D.
nitrogen source L-Citrulline (N) -0.9 +0.6 -0.0 N.D. N.D.
stress Lomefloxacin 0.0001 mM -0.8 +0.8 -0.1 N.D. N.D.
stress Cobalt chloride 0.08 mM +0.5 -0.7 +0.2 N.D. N.D.
stress 2-Furfuraldehyde 0.05 vol% +1.1 -0.7 -0.2 N.D. N.D.
stress Lactate-nitrate; anaerobic; cobalt stress sample1 +1.3 -0.1 -0.4 N.D. N.D.
RCH2 grown on a colony of N2C3 +1.2 -0.7 +0.4 N.D. N.D.
nitrogen source L-Glutamic (N) +1.0 +0.3 -0.2 N.D. N.D.
temperature LB 30C timecourse1 timepoint 3 +0.6 +0.7 +0.2 N.D. N.D.
carbon source L-tyrosine (C) +0.6 +0.2 +0.6 N.D. N.D.
stress Polymyxin B sulfate 0.0001 mg/ml +0.7 +0.4 +0.4 N.D. N.D.
stress Cisplatin 0.003 mg/ml +0.3 +0.8 +0.4 N.D. N.D.
vitamin No vitamins t1 +0.7 +0.4 +0.5 N.D. N.D.
nitrogen source L-Isoleucine (N) +0.3 +0.7 +0.6 N.D. N.D.
stress Cisplatin 0.0016 mg/ml +1.0 +0.5 +0.1 N.D. N.D.
stress Def Benzethonium chloride 0.008 mM +0.7 +0.6 +0.3 N.D. N.D.
carbon source RCH2 defined media +0.9 +0.5 +0.3 N.D. N.D.
carbon source L-Glutamine (C) +0.7 +0.4 +0.6 N.D. N.D.
stress Cisplatin 0.003 mg/ml +0.5 +0.6 +0.6 N.D. N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml +0.9 +0.4 +0.5 N.D. N.D.
stress Def 2-Furfuraldehyde 0.032 vol% +0.3 +0.7 +0.8 N.D. N.D.
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.5 +0.7 +0.8 N.D. N.D.
stress Fusidic 0.016 mg/ml +0.5 +0.7 +0.7 N.D. N.D.
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.8 +0.8 +0.4 N.D. N.D.
vitamin No vitamins t2 +1.1 +0.5 +0.5 N.D. N.D.
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