Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2590 and Psest_2591 are separated by 11 nucleotidesPsest_2591 and Psest_2592 are separated by 136 nucleotidesPsest_2592 and Psest_2593 are separated by 56 nucleotidesPsest_2593 and Psest_2594 are separated by 130 nucleotides Psest_2590: Psest_2590 - 3-isopropylmalate dehydratase, small subunit, at 2,772,392 to 2,773,039 _2590 Psest_2591: Psest_2591 - 3-isopropylmalate dehydratase, large subunit, at 2,773,051 to 2,774,478 _2591 Psest_2592: Psest_2592 - Transcriptional regulator, at 2,774,615 to 2,775,490 _2592 Psest_2593: Psest_2593 - Molecular chaperone (small heat shock protein), at 2,775,547 to 2,775,993 _2593 Psest_2594: Psest_2594 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,776,124 to 2,776,870 _2594
Group Condition Psest_2590 Psest_2591 Psest_2592 Psest_2593 Psest_2594
carbon source D,L-Lactate (C) -6.0 -6.4 -0.1 -0.0 -0.3
temperature Glucose defined 30C timecourse1 timepoint 3 -6.0 -6.6 -0.2 +0.2 +0.1
carbon source Glucose defined media -6.2 -6.2 -0.2 -0.2 +0.2
carbon source D-Alanine (C) -6.0 -6.5 +0.2 +0.0 -0.3
carbon source D-Lactate (C) -6.0 -6.3 -0.1 +0.0 +0.1
carbon source D-Alanine (C) -6.0 -6.6 +0.2 +0.1 +0.1
carbon source L-Glutamic (C) -5.8 -6.3 +0.0 +0.1 -0.3
nitrogen source L-Glutamic (N) -5.5 -6.0 -0.1 -0.1 -0.5
carbon source D-Fructose (C) -5.9 -6.2 +0.1 -0.0 -0.1
carbon source D-Maltose (C) -5.9 -6.3 +0.2 +0.1 -0.1
carbon source L-Malic (C) -5.8 -6.3 -0.1 -0.0 +0.2
carbon source Glycerol (C) -5.8 -6.1 -0.3 -0.0 +0.2
carbon source Trisodium citrate (C) -5.9 -6.3 +0.3 +0.3 -0.3
carbon source D-Fructose (C) -5.9 -6.2 +0.2 +0.3 -0.2
carbon source L-Proline (C) -6.0 -5.7 +0.1 -0.1 -0.3
carbon source a-Ketoglutaric (C) -5.9 -6.3 +0.2 +0.1 +0.1
carbon source succinate (C) -5.9 -5.5 +0.3 -0.1 -0.4
carbon source acetate (C) -5.8 -6.0 -0.4 -0.2 +0.6
carbon source Tween 20 (C) -5.9 -6.3 -0.0 +0.2 +0.5
carbon source L-Asparagine (C) -6.0 -5.9 +0.1 +0.1 +0.3
carbon source Fumarate (C) -5.9 -6.2 +0.3 -0.1 +0.4
carbon source L-Lactate (C) -5.7 -5.9 -0.3 +0.0 +0.5
temperature Glucose defined media 37C sample1 -4.9 -6.8 -0.1 +0.1 +0.3
carbon source L-Glutamic (C) -5.9 -6.4 +0.2 +0.2 +0.6
carbon source D-Glucose (C) -5.9 -6.2 +0.0 +0.1 +0.7
carbon source L-Lactate (C) -5.8 -6.1 +0.2 +0.0 +0.5
nitrogen source Urea (N) -5.7 -6.0 +0.3 -0.1 +0.2
nitrogen source Adenine (N) -5.8 -5.5 +0.3 -0.1 +0.5
carbon source Tween 20 (C) -5.6 -5.9 -0.0 +0.0 +1.0
stress Def Benzethonium chloride 0.008 mM -5.9 -6.1 +0.5 +0.6 +0.7
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