Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2556 and Psest_2557 are separated by 277 nucleotidesPsest_2557 and Psest_2558 overlap by 1 nucleotidesPsest_2558 and Psest_2559 are separated by 3 nucleotidesPsest_2559 and Psest_2560 are separated by 195 nucleotides Psest_2556: Psest_2556 - AraC-type DNA-binding domain-containing proteins, at 2,737,693 to 2,738,730 _2556 Psest_2557: Psest_2557 - Protein of unknown function (DUF2474)., at 2,739,008 to 2,739,172 _2557 Psest_2558: Psest_2558 - cytochrome d oxidase, subunit II (cydB), at 2,739,172 to 2,740,179 _2558 Psest_2559: Psest_2559 - Cytochrome bd-type quinol oxidase, subunit 1, at 2,740,183 to 2,741,622 _2559 Psest_2560: Psest_2560 - Zinc metalloprotease (elastase), at 2,741,818 to 2,742,861 _2560
Group Condition Psest_2556 Psest_2557 Psest_2558 Psest_2559 Psest_2560
stress Polymyxin B sulfate 0.0001 mg/ml -0.5 -1.9 -0.4 -0.1 -0.3
stress nitrite 2.5 mM -0.2 -1.5 -0.7 -0.3 +0.2
stress Nickel (II) chloride 1 mM +0.1 -2.3 -0.0 -0.1 -0.1
stress Lactate-nitrate; anaerobic; dichromate stress sample1 -0.1 -2.4 -0.2 +0.3 +0.0
stress Nickel (II) chloride 0.8 mM -0.2 -1.4 +0.0 -0.1 -0.4
RCH2 grown on a colony of 8R2A -0.6 -1.0 +0.1 -0.3 -0.2
carbon source propionate (C) +0.1 -1.0 +0.1 -0.5 -0.3
stress Chloride 200 mM -1.1 -0.3 -0.3 +0.1 +0.2
RCH2 grown on a colony of N2C3 +0.2 -1.3 +0.1 -0.2 -0.2
stress Nickel (II) chloride 1 mM +0.1 -1.9 +0.3 +0.1 +0.2
stress Nickel (II) chloride 0.8 mM +0.1 -1.6 +0.5 +0.1 +0.0
stress Lactate-nitrate; anaerobic; dichromate stress sample3 +0.0 -1.4 -0.2 +0.5 +0.2
stress Lactate-nitrate; anaerobic; nickel stress sample2 -0.3 -0.9 -0.2 +0.2 +0.5
stress Lactate-nitrate; anaerobic; cobalt stress sample2 -0.2 -0.9 -0.2 +0.4 +0.2
RCH2 grown on a colony of N2F3 -0.1 +0.6 -0.1 -0.8 -0.3
stress Lactate-nitrate; anaerobic; dichromate stress sample2 -0.2 -1.0 +0.1 +0.5 +0.2
stress Nickel (II) chloride 0.8 mM +0.1 -1.2 +0.2 +0.3 +0.2
stress Lactate-nitrate; anaerobic; cadmium stress sample1 -0.2 -0.7 -0.3 +0.4 +0.3
stress Lactate-nitrate; anaerobic sample1 +0.0 -0.7 -0.2 +0.8 -0.2
stress A22 0.002 mg/ml -0.6 +0.8 -0.3 +0.1 -0.3
anaerobic Nitrate/ lactate media with Nitrate 250mM -0.1 +0.6 -0.5 -0.4 +0.2
stress Chloride 200 mM -1.0 +0.9 +0.0 -0.1 +0.2
stress nitrite 2.5 mM +0.2 +1.0 -0.7 -0.3 +0.1
stress A22 0.005 mg/ml -0.4 +1.0 +0.0 +0.1 -0.3
stress A22 0.002 mg/ml -0.5 +0.5 +0.2 +0.5 -0.1
stress Def 2-Furfuraldehyde 0.032 vol% -0.3 +0.8 +0.5 -0.5 +0.2
RCH2 grown on a colony of ecoli +0.1 +1.6 -0.3 -0.2 +0.4
RCH2 grown on a colony of Serratia +0.4 +1.5 -0.5 +0.2 +0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.1 +2.4 +0.1 -0.2 -0.2
stress Def Benzalkonium Chloride 0.002 mg/ml -0.2 +1.3 +0.4 +0.1 +0.7
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