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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2528 and Psest_2529 are separated by 3 nucleotides
Psest_2529 and Psest_2530 are separated by 0 nucleotides
Psest_2530 and Psest_2531 are separated by 137 nucleotides
Psest_2531 and Psest_2532 are separated by 12 nucleotides
Psest_2528: Psest_2528 - cytochrome c oxidase, cbb3-type, subunit II, at 2,709,325 to 2,709,936
_2528
Psest_2529: Psest_2529 - Cbb3-type cytochrome oxidase, subunit 3, at 2,709,940 to 2,710,128
_2529
Psest_2530: Psest_2530 - cytochrome c oxidase, cbb3-type, subunit III, at 2,710,129 to 2,711,046
_2530
Psest_2531: Psest_2531 - cytochrome c oxidase accessory protein FixG, at 2,711,184 to 2,712,596
_2531
Psest_2532: Psest_2532 - Uncharacterized protein conserved in bacteria, at 2,712,609 to 2,713,109
_2532
Group
Condition
Psest
_2528
Psest
_2529
Psest
_2530
Psest
_2531
Psest
_2532
stress
Def Chlorate 20 mM
N.D.
N.D.
-3.0
-3.1
-3.4
stress
Def Chlorate 40 mM
N.D.
N.D.
-2.7
-3.5
-3.4
stress
Chlorate 75 mM
N.D.
N.D.
-2.1
-3.1
-3.4
nitrogen source
nitrite (N)
N.D.
N.D.
-1.9
-1.5
-2.3
stress
Furfuryl Alcohol 0.3 vol%
N.D.
N.D.
-2.3
-1.6
-1.7
nitrogen source
L-Alanine (N)
N.D.
N.D.
-1.9
-1.1
-2.7
stress
Carbenicillin 0.008 mg/ml
N.D.
N.D.
-2.1
-1.8
-1.7
nitrogen source
nitrite (N)
N.D.
N.D.
-1.6
-1.5
-2.5
carbon source
D-Lactate (C)
N.D.
N.D.
-2.4
-0.9
-2.1
stress
perchlorate 25 mM
N.D.
N.D.
-2.3
-2.1
-1.0
stress
perchlorate 25 mM
N.D.
N.D.
-1.8
-1.6
-1.9
temperature
Glucose defined 30C timecourse1 timepoint 3
N.D.
N.D.
-1.0
-2.2
-2.1
stress
Carbenicillin 0.008 mg/ml
N.D.
N.D.
-1.9
-1.5
-1.8
nitrogen source
nitrate (N)
N.D.
N.D.
-1.7
-1.3
-2.2
stress
Cisplatin 0.003 mg/ml
N.D.
N.D.
-1.7
-1.0
-2.4
stress
2-Furfuraldehyde 0.05 vol%
N.D.
N.D.
-2.6
-0.5
-1.9
stress
Def Cephalothin 0.04 mg/ml
N.D.
N.D.
-1.2
-1.9
-1.9
stress
Def sodium fluoride 25 mM
N.D.
N.D.
-1.4
-1.7
-1.8
carbon source
Ethanol (C)
N.D.
N.D.
+1.7
+1.6
+1.7
stress
Choline chloride 90 mM
N.D.
N.D.
+1.9
+1.5
+1.7
carbon source
Ethanol (C)
N.D.
N.D.
+1.7
+1.5
+2.1
stress
A22 0.005 mg/ml
N.D.
N.D.
+1.9
+1.6
+2.1
stress
Cephalothin 0.04 mg/ml
N.D.
N.D.
+2.2
+2.0
+2.4
anaerobic
nitrate reduction - anaerobic
N.D.
N.D.
+2.5
+1.7
+2.4
stress
Def Benzalkonium Chloride 0.002 mg/ml
N.D.
N.D.
+3.1
+1.5
+2.1
stress
nitrate 250 mM
N.D.
N.D.
+2.8
+1.9
+2.4
stress
Fusidic 0.016 mg/ml
N.D.
N.D.
+2.5
+2.7
+2.3
stress
L-Lysine 200 mM
N.D.
N.D.
+3.0
+2.0
+2.8
stress
L-Lysine 200 mM
N.D.
N.D.
+3.1
+2.4
+2.9
stress
Gentamicin 0.0016 mg/ml
N.D.
N.D.
+3.4
+2.1
+3.4
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