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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_2514 and Psest_2515 are separated by 147 nucleotides
Psest_2515 and Psest_2516 overlap by 4 nucleotides
Psest_2516 and Psest_2517 overlap by 1 nucleotides
Psest_2517 and Psest_2518 overlap by 10 nucleotides
Psest_2514: Psest_2514 - Predicted membrane protein, at 2,692,158 to 2,692,637
_2514
Psest_2515: Psest_2515 - cytochrome c oxidase, subunit II, at 2,692,785 to 2,693,675
_2515
Psest_2516: Psest_2516 - cytochrome c oxidase, subunit I, at 2,693,672 to 2,696,197
_2516
Psest_2517: Psest_2517 - hypothetical protein, at 2,696,197 to 2,696,556
_2517
Psest_2518: Psest_2518 - Predicted membrane protein, at 2,696,547 to 2,697,392
_2518
Group
Condition
Psest
_2514
Psest
_2515
Psest
_2516
Psest
_2517
Psest
_2518
stress
Polymyxin B sulfate 0.0001 mg/ml
N.D.
-0.4
-0.7
-1.4
-0.4
nitrogen source
L-Isoleucine (N)
N.D.
-0.6
-0.6
-0.7
-0.4
stress
Chlorate 75 mM
N.D.
+0.3
-0.0
-2.6
+0.2
stress
Aluminum chloride 0.3 mM
N.D.
-0.7
-0.0
-0.8
-0.3
stress
sodium fluoride 6.25 mM
N.D.
-0.3
-0.6
-0.6
-0.3
stress
nitrate 250 mM
N.D.
+0.7
-0.6
-1.3
-0.6
stress
Choline Lysine 20 mM
N.D.
-0.8
-0.1
-0.3
-0.4
stress
nitrate 200 mM
N.D.
-0.0
-0.4
-0.9
-0.4
stress
A22 0.002 mg/ml
N.D.
-0.6
-0.1
-0.7
-0.2
stress
Benzalkonium Chloride 0.002 mg/ml
N.D.
+0.3
-0.3
-1.4
-0.1
stress
L-Lysine 200 mM
N.D.
-0.4
-0.1
-0.7
-0.3
stress
A22 0.005 mg/ml
N.D.
-0.7
-0.3
-0.3
-0.1
stress
Carbenicillin 0.008 mg/ml
N.D.
-0.4
-0.2
-0.6
-0.1
stress
methylglyoxal 0.0016 vol%
N.D.
+0.3
-0.2
-1.6
+0.1
stress
Nalidixic 0.00390625 mg/ml
N.D.
+0.2
+0.1
-1.2
-0.2
carbon source
butyrate (C)
N.D.
+0.3
-0.0
-1.1
-0.2
stress
Fusidic 0.016 mg/ml
N.D.
+0.5
-0.2
-0.8
-0.4
stress
Cephalothin 0.04 mg/ml
N.D.
+0.7
-0.2
-0.8
-0.4
carbon source
L-tyrosine (C)
N.D.
+0.5
-0.1
-1.1
+0.3
stress
Def Benzalkonium Chloride 0.002 mg/ml
N.D.
+0.5
+0.2
-1.2
+0.0
carbon source
propionate (C)
N.D.
+0.8
+0.1
-0.8
-0.2
carbon source
D-Gluconic Acid (C)
N.D.
+0.7
-0.2
-0.4
-0.2
stress
Def Carbenicillin 0.008 mg/ml
N.D.
+1.0
+0.1
-0.9
-0.1
stress
Bacitracin 0.25 mg/ml
N.D.
-0.6
-0.1
+0.9
+0.1
RCH2 grown on a colony of Serratia
N.D.
-0.4
+0.0
+0.9
-0.2
RCH2 grown on a colony of 8R2A
N.D.
+0.4
-0.2
+0.8
-0.4
stress
Spectinomycin 0.00625 mg/ml
N.D.
+0.4
-0.3
+0.7
+0.0
carbon source
L-Proline (C)
N.D.
+0.5
+0.3
+0.4
+0.2
lb
LB
N.D.
+0.7
+0.5
+0.4
+0.2
stress
perchlorate 25 mM
N.D.
+0.8
+0.4
+0.3
+0.5
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