Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2507 and Psest_2508 are separated by 401 nucleotidesPsest_2508 and Psest_2509 are separated by 313 nucleotidesPsest_2509 and Psest_2510 are separated by 181 nucleotidesPsest_2510 and Psest_2511 are separated by 241 nucleotides Psest_2507: Psest_2507 - Flagellin and related hook-associated proteins, at 2,680,494 to 2,681,678 _2507 Psest_2508: Psest_2508 - DNA ligase, NAD-dependent, at 2,682,080 to 2,684,455 _2508 Psest_2509: Psest_2509 - cell division protein ZipA, at 2,684,769 to 2,685,590 _2509 Psest_2510: Psest_2510 - chromosome segregation protein SMC, common bacterial type, at 2,685,772 to 2,689,260 _2510 Psest_2511: Psest_2511 - molybdenum cofactor biosynthesis protein A, bacterial, at 2,689,502 to 2,690,497 _2511
Group Condition Psest_2507 Psest_2508 Psest_2509 Psest_2510 Psest_2511
stress Def Benzethonium chloride 0.008 mM -3.3 N.D. N.D. -0.2 -0.2
nitrogen source nitrate (N) -0.3 N.D. N.D. +0.4 -3.1
nitrogen source nitrate (N) -0.3 N.D. N.D. +0.1 -2.6
nitrogen source nitrate (N) -0.2 N.D. N.D. +0.2 -2.7
stress Def Benzalkonium Chloride 0.002 mg/ml -1.9 N.D. N.D. -0.6 -0.0
carbon source D-Alanine (C) -2.3 N.D. N.D. +0.1 -0.2
carbon source D-Alanine (C) -1.9 N.D. N.D. -0.1 -0.1
stress nitrate 250 mM -1.3 N.D. N.D. +0.2 -0.9
carbon source Anaerobic, Glucose Nitrate sample3 -1.3 N.D. N.D. -0.3 -0.2
RCH2 grown on a colony of N2F3 +0.2 N.D. N.D. -0.5 -1.0
carbon source D-Maltose (C) -1.3 N.D. N.D. +0.3 -0.2
carbon source L-Proline (C) -1.4 N.D. N.D. +0.2 +0.1
carbon source L-Proline (C) -1.5 N.D. N.D. +0.1 +0.5
nitrogen source L-Valine (N) +0.8 N.D. N.D. +0.4 -0.6
stress Bacitracin 0.25 mg/ml +1.4 N.D. N.D. -0.1 -0.5
stress Vancomycin 0.016 mg/ml +1.3 N.D. N.D. -0.3 -0.1
stress Cephalothin 0.04 mg/ml +1.4 N.D. N.D. -0.2 +0.1
stress Bacitracin 0.25 mg/ml +1.7 N.D. N.D. -0.1 -0.0
stress Gentamicin 0.0016 mg/ml +1.4 N.D. N.D. +0.4 -0.2
stress Vancomycin 0.016 mg/ml +1.8 N.D. N.D. -0.1 +0.1
vitamin No vitamins t2 +1.6 N.D. N.D. +0.3 -0.0
vitamin With vitamins t2 +1.7 N.D. N.D. +0.4 -0.2
nutrient L-Histidine +2.5 N.D. N.D. +0.1 -0.3
vitamin No vitamins t1 +2.1 N.D. N.D. +0.2 -0.0
nutrient L-Histidine +2.9 N.D. N.D. +0.0 -0.3
vitamin With vitamins t1 +2.5 N.D. N.D. +0.4 -0.3
nutrient Min media with glucose +2.5 N.D. N.D. +0.3 -0.0
nutrient L-tyrosine +3.7 N.D. N.D. -0.0 -0.4
nutrient Min media with glucose +3.1 N.D. N.D. +0.3 +0.1
nutrient L-tyrosine +3.8 N.D. N.D. +0.4 +0.2
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