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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_2499 and Psest_2500 are separated by 203 nucleotides
Psest_2500 and Psest_2501 are separated by 129 nucleotides
Psest_2501 and Psest_2502 are separated by 97 nucleotides
Psest_2502 and Psest_2503 are separated by 143 nucleotides
Psest_2499: Psest_2499 - citrate synthase I (hexameric type), at 2,674,990 to 2,676,261
_2499
Psest_2500: Psest_2500 - hypothetical protein, at 2,676,465 to 2,676,716
_2500
Psest_2501: Psest_2501 - Uncharacterized protein conserved in bacteria, at 2,676,846 to 2,677,187
_2501
Psest_2502: Psest_2502 - Uncharacterized protein conserved in bacteria, at 2,677,285 to 2,677,566
_2502
Psest_2503: Psest_2503 - hypothetical protein, at 2,677,710 to 2,678,003
_2503
Group
Condition
Psest
_2499
Psest
_2500
Psest
_2501
Psest
_2502
Psest
_2503
RCH2 grown on a colony of N2C3
N.D.
-0.8
+0.0
-0.0
-1.9
carbon source
L-Alanine (C)
N.D.
-1.0
-0.0
-0.9
-0.1
RCH2 grown on a colony of ecoli
N.D.
-1.0
-0.0
-0.9
+0.0
stress
Cobalt chloride 0.08 mM
N.D.
-1.0
-0.1
-0.4
-0.4
stress
Chlorate 75 mM
N.D.
-0.6
-0.3
-0.9
-0.1
stress
Carbenicillin 0.008 mg/ml
N.D.
-1.1
-0.1
-0.2
-0.5
stress
Furfuryl Alcohol 0.05 vol%
N.D.
+0.3
-0.5
-1.1
-0.2
stress
Def 2-Furfuraldehyde 0.032 vol%
N.D.
-0.1
-0.3
+0.5
-1.2
stress
nitrite 2.5 mM
N.D.
-0.8
-0.3
+0.4
-0.2
RCH2 grown on a colony of N2A2
N.D.
+0.3
+0.2
-0.9
-0.3
carbon source
D-Gluconic Acid (C)
N.D.
-1.0
-0.3
+0.0
+0.6
carbon source
RCH2 defined media
N.D.
+0.2
-0.3
+0.3
-0.9
stress
Carbenicillin 0.008 mg/ml
N.D.
-0.3
-0.4
+0.6
-0.5
stress
Def Carbenicillin 0.008 mg/ml
N.D.
+0.2
-0.2
+0.8
-0.9
vitamin
With vitamins t1
N.D.
-0.9
-0.1
+0.1
+0.8
stress
L-Lysine 200 mM
N.D.
+1.2
-0.0
-0.4
-0.5
stress
nitrate 200 mM
N.D.
+0.6
-0.1
+0.7
-0.6
stress
Lomefloxacin 0.0001 mM
N.D.
+1.3
-0.1
-0.2
-0.2
stress
Benzethonium chloride 0.0125 mM
N.D.
+1.1
+0.4
-0.5
-0.0
nutrient
L-Histidine
N.D.
-0.5
+0.0
+0.6
+0.9
stress
Dimethyl Sulfoxide 5 vol%
N.D.
+0.7
+0.1
-0.5
+0.7
RCH2 grown on a colony of ecoli
N.D.
+1.1
-0.2
-0.4
+0.5
stress
Neomycin 0.004 mg/ml
N.D.
+1.3
-0.1
-0.1
+0.3
stress
Thallium(I) acetate 0.1 mg/ml
N.D.
+1.2
+0.2
+0.3
-0.3
stress
Cobalt chloride 0.05 mM
N.D.
+0.7
+0.3
+0.6
-0.1
lb
LB
N.D.
+1.0
-0.0
+0.7
-0.1
stress
Bacitracin 0.25 mg/ml
N.D.
+0.6
+0.2
-0.1
+1.1
stress
Choline chloride 90 mM
N.D.
+0.6
+0.2
+0.8
+0.7
carbon source
propionate (C)
N.D.
+0.5
+0.8
+1.1
+0.3
carbon source
propionate (C)
N.D.
+1.3
+0.5
+1.0
+0.0
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