Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2486 and Psest_2487 overlap by 4 nucleotidesPsest_2487 and Psest_2488 are separated by 60 nucleotidesPsest_2488 and Psest_2489 are separated by 121 nucleotidesPsest_2489 and Psest_2490 are separated by 396 nucleotides Psest_2486: Psest_2486 - Uncharacterized protein, possibly involved in aromatic compounds catabolism, at 2,659,688 to 2,660,131 _2486 Psest_2487: Psest_2487 - uncharacterized domain 1, at 2,660,128 to 2,660,589 _2487 Psest_2488: Psest_2488 - Predicted membrane protein, at 2,660,650 to 2,661,375 _2488 Psest_2489: Psest_2489 - branched-chain amino acid uptake carrier, at 2,661,497 to 2,662,813 _2489 Psest_2490: Psest_2490 - succinyl-CoA synthetase, alpha subunit, at 2,663,210 to 2,664,094 _2490
Group Condition Psest_2486 Psest_2487 Psest_2488 Psest_2489 Psest_2490
stress Chlorate 75 mM -1.7 +0.1 -1.1 +0.3 -1.5
anaerobic Nitrite/ lactate media with Nitrite 20mM -0.4 -0.0 -0.3 -0.1 -3.1
anaerobic Nitrite/ lactate media with Nitrite 20mM +0.4 +0.0 -0.7 -0.2 -3.1
anaerobic Nitrite/ lactate media with Nitrite 20mM -0.1 -0.1 -0.0 -0.4 -2.8
anaerobic Nitrite/ lactate media with Nitrite 20mM -0.3 +0.1 +0.0 -0.1 -3.2
anaerobic Nitrite/ lactate media with Nitrite 20mM +0.1 -0.1 -0.2 +0.1 -3.1
anaerobic Nitrite/ lactate media with Nitrite 20mM +0.2 +0.1 -0.2 -0.3 -3.0
metal limitation Lactate-nitrite with YE; anaerobic; with copper; sample1 -0.3 -0.4 -0.4 -0.3 -1.4
stress 2-Furfuraldehyde 0.05 vol% +0.6 -0.4 -0.0 +0.1 -3.1
anaerobic Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten +0.5 -0.1 -0.3 -0.2 -2.2
stress Nalidixic 0.00390625 mg/ml -2.5 -0.2 -0.0 +0.4 -0.1
anaerobic Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten +0.1 -0.0 -0.5 +0.3 -2.2
anaerobic Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten -0.4 -0.3 +0.1 +0.3 -1.9
anaerobic Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten -0.1 -0.0 +0.2 +0.0 -2.3
stress 1-ethyl-3-methylimidazolium acetate 40 mM -0.2 -0.4 -1.8 -0.3 +0.5
anaerobic Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten +0.4 -0.1 -0.1 +0.1 -2.0
anaerobic Nitrate/ lactate media with Nitrate 50mM -0.6 +0.0 +0.2 +0.2 -1.5
stress 2-Furfuraldehyde 0.05 vol% +0.3 +0.1 +0.6 -0.3 -2.4
stress Nalidixic 0.00390625 mg/ml +0.5 -0.5 -1.0 -0.6 +0.4
stress nitrate 200 mM +0.2 -0.4 -1.6 +0.2 +0.3
stress nitrite 2.5 mM -0.6 +0.0 +1.0 -0.2 -1.1
RCH2 grown on a colony of Serratia -1.0 -0.1 +1.0 -0.5 -0.1
stress nitrite 2.5 mM -0.6 +0.4 +0.8 +0.0 -1.0
stress Nickel (II) chloride 0.8 mM -0.2 -0.2 -1.0 +0.7 +0.9
carbon source L-tyrosine (C) -0.7 +0.4 +0.3 -0.8 +1.4
carbon source L-tyrosine (C) -0.1 +0.4 -0.6 -0.7 +1.8
RCH2 grown on a colony of N2F3 -0.7 +0.6 -0.3 +0.8 +0.5
stress Fusidic 0.016 mg/ml -0.2 -0.5 -0.2 +0.5 +1.4
stress Def Benzalkonium Chloride 0.002 mg/ml -0.4 -0.2 +0.4 +0.7 +1.0
stress Cephalothin 0.04 mg/ml -0.4 -0.3 +0.1 +1.0 +1.5
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