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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2448 and Psest_2449 are separated by 71 nucleotides
Psest_2449 and Psest_2450 are separated by 239 nucleotides
Psest_2450 and Psest_2451 are separated by 261 nucleotides
Psest_2451 and Psest_2452 are separated by 64 nucleotides
Psest_2448: Psest_2448 - AraC-type DNA-binding domain-containing proteins, at 2,617,175 to 2,618,242
_2448
Psest_2449: Psest_2449 - Predicted membrane protein, at 2,618,314 to 2,618,751
_2449
Psest_2450: Psest_2450 - hypothetical protein, at 2,618,991 to 2,619,446
_2450
Psest_2451: Psest_2451 - Glutaredoxin and related proteins, at 2,619,708 to 2,620,814
_2451
Psest_2452: Psest_2452 - Cytochrome c bacterial./Doubled CXXCH motif (Paired_CXXCH_1)., at 2,620,879 to 2,622,465
_2452
Group
Condition
Psest
_2448
Psest
_2449
Psest
_2450
Psest
_2451
Psest
_2452
carbon source
L-Isoleucine (C)
-6.5
-0.1
+0.0
+0.1
-0.0
carbon source
L-Isoleucine (C)
-5.1
+0.1
+0.1
-0.1
-0.1
RCH2 grown on a colony of N2F3
-1.9
-0.5
-0.7
-0.8
-0.1
nitrogen source
nitrite (N)
+0.0
-1.2
-1.0
-0.5
-0.1
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.1
-0.9
-0.4
-0.8
+0.0
stress
Def Carbenicillin 0.008 mg/ml
-0.0
-0.5
-0.7
-0.8
+0.2
stress
Thallium(I) acetate 0.1 mg/ml
-0.9
-0.0
-0.7
-0.3
+0.0
stress
Nalidixic 0.00390625 mg/ml
-0.5
-0.5
-0.6
-0.2
-0.0
stress
Def Carbenicillin 0.02 mg/ml
-1.1
-0.9
+0.3
-0.1
+0.1
stress
Def Fusidic 0.032 mg/ml
-0.8
-0.3
-0.3
-0.2
-0.1
nitrogen source
L-Isoleucine (N)
-1.5
+0.3
-0.3
-0.1
+0.0
stress
Cephalothin 0.04 mg/ml
-0.5
-0.1
-1.0
-0.5
+0.5
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.8
+0.3
-0.3
-0.7
-0.1
lb
LB
-1.6
-0.2
+0.3
+0.2
-0.3
stress
Def 5-Hydroxymethylfurfural 5 mM
-0.8
+0.2
-0.7
-0.0
-0.0
RCH2 grown on a colony of N2F3
-0.2
-1.3
+0.1
+0.4
-0.1
carbon source
RCH2 defined media
+0.5
-0.3
-0.5
-0.4
+0.1
RCH2 grown on a colony of ecoli
-0.5
-0.3
+0.6
-0.3
+0.1
stress
Thallium(I) acetate 0.09 mg/ml
-0.9
-0.0
+0.7
+0.1
-0.0
stress
Fusidic 0.016 mg/ml
-0.5
+0.2
-0.2
-0.2
+0.6
anaerobic
Nitrate/ lactate media with Nitrate 250mM
+0.5
-0.5
+0.4
-0.4
-0.1
stress
Nalidixic 0.00390625 mg/ml
-0.7
-0.4
+0.4
+0.4
+0.4
RCH2 grown on a colony of 8R2A
-0.5
+0.7
+0.2
-0.3
+0.1
stress
perchlorate 25 mM
+0.4
-0.8
+0.2
+0.2
+0.3
stress
Furfuryl Alcohol 0.05 vol%
+0.9
+0.4
-0.5
+0.2
-0.5
temperature
LB 30C timecourse2 timepoint 1
+0.6
-0.5
+0.6
-0.1
-0.0
stress
Benzalkonium Chloride 0.002 mg/ml
+0.7
+0.5
-0.6
-0.0
+0.1
nitrogen source
L-Isoleucine (N)
-0.5
+0.9
+0.3
+0.3
+0.1
carbon source
propionate (C)
+0.2
+0.9
+0.5
-0.1
-0.0
stress
Def Cephalothin 0.04 mg/ml
+0.4
+0.5
+0.3
+0.4
+0.3
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