Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2448 and Psest_2449 are separated by 71 nucleotidesPsest_2449 and Psest_2450 are separated by 239 nucleotidesPsest_2450 and Psest_2451 are separated by 261 nucleotidesPsest_2451 and Psest_2452 are separated by 64 nucleotides Psest_2448: Psest_2448 - AraC-type DNA-binding domain-containing proteins, at 2,617,175 to 2,618,242 _2448 Psest_2449: Psest_2449 - Predicted membrane protein, at 2,618,314 to 2,618,751 _2449 Psest_2450: Psest_2450 - hypothetical protein, at 2,618,991 to 2,619,446 _2450 Psest_2451: Psest_2451 - Glutaredoxin and related proteins, at 2,619,708 to 2,620,814 _2451 Psest_2452: Psest_2452 - Cytochrome c bacterial./Doubled CXXCH motif (Paired_CXXCH_1)., at 2,620,879 to 2,622,465 _2452
Group Condition Psest_2448 Psest_2449 Psest_2450 Psest_2451 Psest_2452
carbon source L-Isoleucine (C) -6.5 -0.1 +0.0 +0.1 -0.0
carbon source L-Isoleucine (C) -5.1 +0.1 +0.1 -0.1 -0.1
RCH2 grown on a colony of N2F3 -1.9 -0.5 -0.7 -0.8 -0.1
nitrogen source nitrite (N) +0.0 -1.2 -1.0 -0.5 -0.1
stress Def Benzalkonium Chloride 0.002 mg/ml +0.1 -0.9 -0.4 -0.8 +0.0
stress Def Carbenicillin 0.008 mg/ml -0.0 -0.5 -0.7 -0.8 +0.2
stress Thallium(I) acetate 0.1 mg/ml -0.9 -0.0 -0.7 -0.3 +0.0
stress Nalidixic 0.00390625 mg/ml -0.5 -0.5 -0.6 -0.2 -0.0
stress Def Carbenicillin 0.02 mg/ml -1.1 -0.9 +0.3 -0.1 +0.1
stress Def Fusidic 0.032 mg/ml -0.8 -0.3 -0.3 -0.2 -0.1
nitrogen source L-Isoleucine (N) -1.5 +0.3 -0.3 -0.1 +0.0
stress Cephalothin 0.04 mg/ml -0.5 -0.1 -1.0 -0.5 +0.5
stress Def 2-Furfuraldehyde 0.032 vol% -0.8 +0.3 -0.3 -0.7 -0.1
lb LB -1.6 -0.2 +0.3 +0.2 -0.3
stress Def 5-Hydroxymethylfurfural 5 mM -0.8 +0.2 -0.7 -0.0 -0.0
RCH2 grown on a colony of N2F3 -0.2 -1.3 +0.1 +0.4 -0.1
carbon source RCH2 defined media +0.5 -0.3 -0.5 -0.4 +0.1
RCH2 grown on a colony of ecoli -0.5 -0.3 +0.6 -0.3 +0.1
stress Thallium(I) acetate 0.09 mg/ml -0.9 -0.0 +0.7 +0.1 -0.0
stress Fusidic 0.016 mg/ml -0.5 +0.2 -0.2 -0.2 +0.6
anaerobic Nitrate/ lactate media with Nitrate 250mM +0.5 -0.5 +0.4 -0.4 -0.1
stress Nalidixic 0.00390625 mg/ml -0.7 -0.4 +0.4 +0.4 +0.4
RCH2 grown on a colony of 8R2A -0.5 +0.7 +0.2 -0.3 +0.1
stress perchlorate 25 mM +0.4 -0.8 +0.2 +0.2 +0.3
stress Furfuryl Alcohol 0.05 vol% +0.9 +0.4 -0.5 +0.2 -0.5
temperature LB 30C timecourse2 timepoint 1 +0.6 -0.5 +0.6 -0.1 -0.0
stress Benzalkonium Chloride 0.002 mg/ml +0.7 +0.5 -0.6 -0.0 +0.1
nitrogen source L-Isoleucine (N) -0.5 +0.9 +0.3 +0.3 +0.1
carbon source propionate (C) +0.2 +0.9 +0.5 -0.1 -0.0
stress Def Cephalothin 0.04 mg/ml +0.4 +0.5 +0.3 +0.4 +0.3
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