Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2406 and Psest_2407 overlap by 1 nucleotidesPsest_2407 and Psest_2408 are separated by 167 nucleotidesPsest_2408 and Psest_2409 are separated by 29 nucleotidesPsest_2409 and Psest_2410 are separated by 3 nucleotides Psest_2406: Psest_2406 - nitrite reductase [NAD(P)H], large subunit, at 2,560,243 to 2,562,801 _2406 Psest_2407: Psest_2407 - nitrite reductase [NAD(P)H], small subunit, at 2,562,801 to 2,563,184 _2407 Psest_2408: Psest_2408 - Formate/nitrite family of transporters, at 2,563,352 to 2,564,164 _2408 Psest_2409: Psest_2409 - Serine/threonine protein phosphatase, at 2,564,194 to 2,565,945 _2409 Psest_2410: Psest_2410 - Superfamily I DNA and RNA helicases, at 2,565,949 to 2,567,919 _2410
Group Condition Psest_2406 Psest_2407 Psest_2408 Psest_2409 Psest_2410
nitrogen source nitrate (N) -1.3 -1.5 +0.0 -0.2 -0.0
lb LB -0.3 -0.4 -0.5 -0.4 -0.7
stress 5-Hydroxymethylfurfural 5 mM -0.2 -0.3 -0.4 -0.5 -0.8
stress Def A22 0.015 mg/ml -0.2 -0.9 -0.3 -0.3 -0.2
nitrogen source nitrate (N) -0.8 -0.8 +0.2 -0.2 -0.2
nitrogen source L-Isoleucine (N) -0.2 -1.2 -0.1 +0.1 -0.2
stress Spectinomycin 0.00625 mg/ml +0.2 -1.2 +0.0 -0.4 -0.2
nitrogen source nitrate (N) -1.1 -0.3 -0.1 +0.2 -0.2
stress Def Lomefloxacin 0.00004 mM -0.1 -1.4 -0.0 +0.2 +0.1
RCH2 grown on a colony of N2F3 -0.7 -0.4 +0.4 -0.5 +0.0
nitrogen source L-Citrulline (N) -0.3 +0.4 -0.3 -0.5 -0.5
stress Spectinomycin 0.00625 mg/ml +0.3 -1.0 +0.3 -0.5 +0.1
nitrogen source D-Alanine (N) -0.2 -1.1 +0.3 +0.2 -0.1
stress Cisplatin 0.003 mg/ml +0.2 +0.6 -0.0 -0.2 -0.9
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample3 -0.1 -1.0 +0.2 +0.3 +0.4
stress Nalidixic 0.00390625 mg/ml -0.3 +1.2 -0.1 +0.1 -0.9
stress Furfuryl Alcohol 0.05 vol% +0.1 +0.8 -0.3 -0.4 -0.3
RCH2 grown on a colony of N2C3 +0.4 -0.3 +0.2 +0.4 -0.6
nutrient L-tyrosine -0.0 +0.7 +0.3 -0.4 -0.4
stress Lactate-nitrate; anaerobic; copper stress sample2 -0.2 -0.6 +0.3 +0.4 +0.3
carbon source butyrate (C) +0.1 -0.7 +0.5 +0.2 +0.3
stress Nalidixic 0.00390625 mg/ml +0.4 -0.7 +0.2 +1.3 -0.8
RCH2 grown on a colony of N2F3 -0.1 +0.6 +0.4 -0.8 +0.5
vitamin No vitamins t2 -0.1 +1.3 +0.0 -0.3 +0.2
stress Fusidic 0.016 mg/ml +0.0 -0.6 +1.0 +0.5 +0.5
stress Chlorate 75 mM +0.4 +0.8 +0.5 +0.1 +0.0
stress nitrate 200 mM +0.1 +0.9 +0.8 +0.2 +0.1
stress nitrate 250 mM +0.3 +0.2 +0.6 +0.6 +0.6
RCH2 grown on a colony of 8R2A -0.1 +1.4 +0.6 +0.5 +0.5
stress Cephalothin 0.04 mg/ml +0.3 +0.6 +0.8 +0.5 +1.0
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