Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2381 and Psest_2382 are separated by 270 nucleotidesPsest_2382 and Psest_2383 are separated by 34 nucleotidesPsest_2383 and Psest_2384 are separated by 93 nucleotidesPsest_2384 and Psest_2385 overlap by 4 nucleotides Psest_2381: Psest_2381 - hypothetical protein, at 2,533,067 to 2,534,272 _2381 Psest_2382: Psest_2382 - coenzyme PQQ biosynthesis probable peptidase PqqF, at 2,534,543 to 2,537,083 _2382 Psest_2383: Psest_2383 - Predicted transcriptional regulators, at 2,537,118 to 2,538,065 _2383 Psest_2384: Psest_2384 - Uncharacterized protein conserved in bacteria, at 2,538,159 to 2,538,608 _2384 Psest_2385: Psest_2385 - hypothetical protein, at 2,538,605 to 2,538,919 _2385
Group Condition Psest_2381 Psest_2382 Psest_2383 Psest_2384 Psest_2385
carbon source D-Fructose (C) -0.2 -1.9 -1.5 +0.1 N.D.
carbon source succinate (C) -0.2 -2.5 -0.1 -0.6 N.D.
carbon source propionate (C) -0.0 -0.5 -2.2 -0.1 N.D.
RCH2 grown on a colony of N2F3 +0.1 -0.1 -1.3 -1.3 N.D.
carbon source D-Fructose (C) +0.0 -1.5 -1.0 +0.1 N.D.
carbon source propionate (C) +0.6 -0.2 -2.4 -0.1 N.D.
stress Thallium(I) acetate 0.08 mg/ml +0.2 -0.4 -0.6 -1.4 N.D.
carbon source succinate (C) +0.2 -2.3 +0.1 -0.0 N.D.
RCH2 grown on a colony of N2F3 -0.4 +0.4 -1.2 -0.5 N.D.
carbon source Ethanol (C) +1.5 -3.3 +0.2 +0.4 N.D.
carbon source Ethanol (C) +1.5 -3.0 +0.4 +0.6 N.D.
nitrogen source L-Isoleucine (N) -0.1 -0.6 +1.5 -1.2 N.D.
stress Def Benzethonium chloride 0.008 mM +0.5 +0.5 -1.4 +0.1 N.D.
stress nitrate 250 mM -0.1 +0.5 -1.3 +0.6 N.D.
RCH2 grown on a colony of N2C3 -0.1 -0.7 -0.7 +1.5 N.D.
stress Paraquat dichloride 0.015 mg/ml -0.1 -0.5 +1.7 -1.0 N.D.
nitrogen source L-Valine (N) -0.1 -0.9 +1.4 +0.1 N.D.
nitrogen source L-Alanine (N) +0.0 -0.6 +1.6 -0.4 N.D.
carbon source L-tyrosine (C) +0.1 -0.4 +2.3 -0.8 N.D.
stress Phosphomycin 0.012 mg/ml -0.3 +0.1 +2.0 -0.1 N.D.
stress Def Carbenicillin 0.008 mg/ml +0.0 +0.3 +2.1 -0.6 N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml +1.7 +1.1 -1.1 +0.2 N.D.
stress Fusidic 0.016 mg/ml +0.2 +0.6 +1.5 -0.4 N.D.
stress Chlorate 75 mM -0.2 -0.1 +0.8 +1.7 N.D.
carbon source butyrate (C) +0.1 +0.0 +2.3 -0.0 N.D.
temperature LB 30C timecourse1 timepoint 3 -0.0 -0.2 +2.1 +0.5 N.D.
nitrogen source nitrite (N) +0.2 -0.3 +2.7 +0.0 N.D.
carbon source L-tyrosine (C) -0.1 -0.5 +2.8 +0.4 N.D.
nitrogen source nitrite (N) -0.1 -0.7 +3.3 +0.1 N.D.
stress Cephalothin 0.04 mg/ml +0.3 +0.6 +2.2 +0.6 N.D.
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