Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0021 and Psest_0022 overlap by 4 nucleotidesPsest_0022 and Psest_0023 are separated by 55 nucleotidesPsest_0023 and Psest_0024 are separated by 148 nucleotidesPsest_0024 and Psest_0025 are separated by 87 nucleotides Psest_0021: Psest_0021 - ribosomal RNA small subunit methyltransferase RsmB, at 21,703 to 23,025 _0021 Psest_0022: Psest_0022 - methionyl-tRNA formyltransferase, at 23,022 to 23,966 _0022 Psest_0023: Psest_0023 - peptide deformylase, at 24,022 to 24,528 _0023 Psest_0024: Psest_0024 - LysM domain., at 24,677 to 25,702 _0024 Psest_0025: Psest_0025 - DNA protecting protein DprA, at 25,790 to 26,887 _0025
Group Condition Psest_0021 Psest_0022 Psest_0023 Psest_0024 Psest_0025
stress Def Benzethonium chloride 0.008 mM -0.3 N.D. N.D. -4.2 +0.4
carbon source butyrate (C) -0.2 N.D. N.D. -3.3 +0.2
stress Benzethonium chloride 0.0125 mM -0.6 N.D. N.D. -2.6 +0.1
carbon source butyrate (C) -0.1 N.D. N.D. -2.6 +0.1
stress Benzethonium chloride 0.0125 mM +0.0 N.D. N.D. -2.5 +0.1
carbon source L-Leucine (C) -0.0 N.D. N.D. -2.1 -0.0
stress L-Lysine 200 mM -2.5 N.D. N.D. +0.2 +0.4
stress Neomycin 0.004 mg/ml -0.9 N.D. N.D. -0.6 -0.2
stress Def Chlorate 40 mM -1.4 N.D. N.D. +0.3 -0.5
carbon source Glycerol (C) -0.3 N.D. N.D. -1.3 +0.0
stress Def Chloride 400 mM -1.4 N.D. N.D. +0.1 -0.3
carbon source L-Leucine (C) -0.1 N.D. N.D. -1.7 +0.2
stress Def Benzalkonium Chloride 0.002 mg/ml -0.5 N.D. N.D. -1.5 +0.5
RCH2 grown on a colony of N2F3 -1.5 N.D. N.D. +0.2 -0.1
nitrogen source L-Isoleucine (N) +0.2 N.D. N.D. -1.1 -0.4
nitrogen source Urea (N) +0.1 N.D. N.D. -1.2 -0.2
nitrogen source Cytosine (N) -0.6 N.D. N.D. -0.8 +0.2
stress Benzethonium chloride 0.01 mM +0.3 N.D. N.D. -0.9 -0.5
vitamin With vitamins t1 -0.8 N.D. N.D. +0.3 -0.7
stress Fusidic 0.016 mg/ml -2.1 N.D. N.D. +0.0 +1.0
carbon source D-Maltose (C) -0.1 N.D. N.D. -1.3 +0.3
stress Benzethonium chloride 0.01 mM +0.5 N.D. N.D. -1.1 -0.3
carbon source D-Maltose (C) +0.0 N.D. N.D. -1.2 +0.4
vitamin With vitamins t2 -1.0 N.D. N.D. +0.4 -0.2
nitrogen source L-Alanine (N) +0.4 N.D. N.D. -1.2 +0.2
stress Dimethyl Sulfoxide 5 vol% -0.1 N.D. N.D. -1.1 +0.6
carbon source L-tyrosine (C) -1.2 N.D. N.D. -0.2 +0.8
carbon source L-tyrosine (C) -1.2 N.D. N.D. +0.2 +0.6
stress Def Carbenicillin 0.02 mg/ml +0.8 N.D. N.D. +0.2 +0.7
RCH2 grown on a colony of Serratia +1.2 N.D. N.D. +0.1 +1.0
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