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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2332 and Psest_2333 are separated by 363 nucleotides
Psest_2333 and Psest_2334 are separated by 62 nucleotides
Psest_2334 and Psest_2335 are separated by 66 nucleotides
Psest_2335 and Psest_2336 are separated by 43 nucleotides
Psest_2332: Psest_2332 - Predicted acetyltransferase, at 2,486,725 to 2,487,018
_2332
Psest_2333: Psest_2333 - Protein of unknown function (DUF3359)., at 2,487,382 to 2,487,663
_2333
Psest_2334: Psest_2334 - Uncharacterized protein conserved in bacteria, at 2,487,726 to 2,488,691
_2334
Psest_2335: Psest_2335 - hypothetical protein, at 2,488,758 to 2,489,039
_2335
Psest_2336: Psest_2336 - Lysophospholipase L1 and related esterases, at 2,489,083 to 2,489,688
_2336
Group
Condition
Psest
_2332
Psest
_2333
Psest
_2334
Psest
_2335
Psest
_2336
stress
Spectinomycin 0.00625 mg/ml
-1.2
-5.9
-0.4
N.D.
-0.8
stress
Def Benzethonium chloride 0.008 mM
-1.1
-3.9
-0.7
N.D.
-0.8
stress
Polymyxin B sulfate 0.0001 mg/ml
-1.2
-2.5
-2.4
N.D.
-0.2
stress
Bacitracin 0.25 mg/ml
-0.5
-3.0
-2.7
N.D.
-0.1
stress
Def Doxycycline hyclate 0.0006 mg/ml
-1.0
-2.7
-1.6
N.D.
-0.3
stress
Nalidixic 0.00390625 mg/ml
-0.6
-3.6
-1.0
N.D.
-0.4
stress
Phosphomycin 0.012 mg/ml
-0.0
-5.1
-0.2
N.D.
-0.1
stress
Cephalothin 0.04 mg/ml
-0.9
-2.6
-0.9
N.D.
-0.9
stress
Def Polymyxin B sulfate 0.0001 mg/ml
-0.3
-3.9
-0.7
N.D.
-0.2
carbon source
Tween 20 (C)
-0.3
-4.2
-0.4
N.D.
-0.2
stress
Fusidic 0.016 mg/ml
-0.3
-3.9
-0.9
N.D.
+0.0
carbon source
RCH2 defined media
+0.3
-5.3
+0.2
N.D.
-0.2
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.2
-3.7
-0.5
N.D.
-0.6
nitrogen source
Adenine (N)
-0.2
-4.4
-0.3
N.D.
-0.2
temperature
Glucose defined 30C timecourse1 timepoint 3
-0.1
-4.9
-0.1
N.D.
+0.0
stress
Bacitracin 0.25 mg/ml
-0.4
-2.0
-2.5
N.D.
-0.1
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.3
-2.8
-1.2
N.D.
-0.5
stress
Choline Lysine 20 mM
-0.5
-2.9
-0.9
N.D.
-0.5
nitrogen source
Cytosine (N)
+0.2
-5.4
+0.3
N.D.
+0.1
RCH2 grown on a colony of N2F3
-0.6
-3.5
-0.7
N.D.
+0.1
nitrogen source
Urea (N)
-0.0
-4.1
-0.2
N.D.
-0.1
carbon source
D-Maltose (C)
+0.3
-5.4
+0.4
N.D.
+0.3
stress
Vanillin 2 mM
-0.7
-2.4
-0.9
N.D.
-0.4
carbon source
L-Glutamic (C)
-0.0
-3.8
-0.4
N.D.
+0.1
nitrogen source
Cytosine (N)
+0.1
-4.3
+0.3
N.D.
-0.0
carbon source
D-Maltose (C)
+0.3
-4.0
+0.4
N.D.
+0.5
vitamin
With vitamins t2
-0.1
+3.3
-0.9
N.D.
-0.0
nutrient
L-tyrosine
-0.2
+4.7
-0.7
N.D.
-0.1
nutrient
L-tyrosine
-0.6
+5.6
-0.7
N.D.
-0.0
stress
Def Vancomycin 0.016 mg/ml
+1.6
+1.2
+1.2
N.D.
+0.8
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