Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_2330 and Psest_2331 are separated by 261 nucleotidesPsest_2331 and Psest_2332 are separated by 30 nucleotidesPsest_2332 and Psest_2333 are separated by 363 nucleotidesPsest_2333 and Psest_2334 are separated by 62 nucleotides Psest_2330: Psest_2330 - 2-dehydropantoate 2-reductase, at 2,484,400 to 2,485,356 _2330 Psest_2331: Psest_2331 - phospho-2-dehydro-3-deoxyheptonate aldolase, at 2,485,618 to 2,486,694 _2331 Psest_2332: Psest_2332 - Predicted acetyltransferase, at 2,486,725 to 2,487,018 _2332 Psest_2333: Psest_2333 - Protein of unknown function (DUF3359)., at 2,487,382 to 2,487,663 _2333 Psest_2334: Psest_2334 - Uncharacterized protein conserved in bacteria, at 2,487,726 to 2,488,691 _2334
Group Condition Psest_2330 Psest_2331 Psest_2332 Psest_2333 Psest_2334
stress Spectinomycin 0.00625 mg/ml -0.2 -0.2 -1.2 -5.9 -0.4
stress Polymyxin B sulfate 0.0001 mg/ml -0.5 -0.5 -1.2 -2.5 -2.4
temperature Glucose defined 30C timecourse1 timepoint 3 -0.4 -1.0 -0.1 -4.9 -0.1
stress Choline Lysine 20 mM -0.1 -1.9 -0.5 -2.9 -0.9
stress Def Doxycycline hyclate 0.0006 mg/ml -0.6 -0.3 -1.0 -2.7 -1.6
stress Bacitracin 0.25 mg/ml -0.1 +0.0 -0.5 -3.0 -2.7
carbon source D-Maltose (C) +0.0 -1.3 +0.3 -5.4 +0.4
nitrogen source Adenine (N) +0.0 -0.9 -0.2 -4.4 -0.3
stress Def Polymyxin B sulfate 0.0001 mg/ml -0.3 -0.5 -0.3 -3.9 -0.7
stress Def Benzethonium chloride 0.008 mM -0.2 +0.4 -1.1 -3.9 -0.7
stress Fusidic 0.016 mg/ml -0.0 -0.3 -0.3 -3.9 -0.9
stress Phosphomycin 0.012 mg/ml +0.1 -0.2 -0.0 -5.1 -0.2
carbon source Tween 20 (C) -0.1 -0.4 -0.3 -4.2 -0.4
nitrogen source Urea (N) -0.1 -0.8 -0.0 -4.1 -0.2
carbon source D,L-Lactate (C) -0.1 -1.0 -0.1 -3.7 -0.2
nitrogen source Cytosine (N) +0.0 -0.2 +0.2 -5.4 +0.3
stress Chloride 200 mM -0.7 -0.6 -1.1 -1.7 -1.0
RCH2 grown on a colony of N2F3 +0.2 -0.2 -0.6 -3.5 -0.7
carbon source RCH2 defined media -0.0 +0.1 +0.3 -5.3 +0.2
stress Def 2-Furfuraldehyde 0.032 vol% +0.2 -0.7 -0.2 -3.7 -0.5
carbon source D-Maltose (C) +0.0 -1.5 +0.2 -3.5 +0.2
carbon source D-Maltose (C) +0.0 -1.2 +0.3 -4.0 +0.4
stress Nalidixic 0.00390625 mg/ml +0.6 +0.4 -0.6 -3.6 -1.0
nitrogen source Cytosine (N) -0.0 -0.3 +0.1 -4.3 +0.3
stress Def Benzalkonium Chloride 0.002 mg/ml +0.0 +1.0 -0.3 -2.8 -1.2
carbon source propionate (C) -0.6 +0.9 -0.5 -2.6 -0.4
vitamin With vitamins t2 -0.3 -0.9 -0.1 +3.3 -0.9
nutrient L-tyrosine -0.2 -0.5 -0.6 +5.6 -0.7
nutrient L-tyrosine -0.0 -0.1 -0.2 +4.7 -0.7
stress Def Vancomycin 0.016 mg/ml +0.8 +1.3 +1.6 +1.2 +1.2
remove
Psest_2330
plot
remove
Psest_2331
plot
remove
Psest_2332
remove
Psest_2333
plot
remove
Psest_2334
plot