Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2319 and Psest_2320 are separated by 74 nucleotidesPsest_2320 and Psest_2321 are separated by 92 nucleotidesPsest_2321 and Psest_2322 overlap by 4 nucleotidesPsest_2322 and Psest_2323 are separated by 171 nucleotides Psest_2319: Psest_2319 - aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent, at 2,471,353 to 2,473,956 _2319 Psest_2320: Psest_2320 - 2-methylcitrate synthase/citrate synthase II, at 2,474,031 to 2,475,158 _2320 Psest_2321: Psest_2321 - methylisocitrate lyase, at 2,475,251 to 2,476,144 _2321 Psest_2322: Psest_2322 - Transcriptional regulators, at 2,476,141 to 2,476,866 _2322 Psest_2323: Psest_2323 - Uncharacterized protein conserved in archaea, at 2,477,038 to 2,477,670 _2323
Group Condition Psest_2319 Psest_2320 Psest_2321 Psest_2322 Psest_2323
carbon source propionate (C) N.D. -3.6 -2.7 -2.8 -0.9
carbon source propionate (C) N.D. -3.2 -1.5 -2.4 -0.8
carbon source L-Isoleucine (C) N.D. -4.5 -0.9 -0.9 -0.9
carbon source L-Isoleucine (C) N.D. -3.5 -1.1 -1.3 -0.7
stress Def Benzethonium chloride 0.008 mM N.D. -0.1 -0.0 -0.5 -4.1
carbon source butyrate (C) N.D. -0.3 +0.7 +0.1 -4.1
nitrogen source Cytosine (N) N.D. -0.0 -0.7 -0.5 -2.2
nitrogen source Cytosine (N) N.D. -0.1 -0.2 -0.1 -2.9
stress nitrate 250 mM N.D. -0.3 -0.6 -0.8 -1.4
nitrogen source L-Glutamine (N) N.D. -0.2 -0.5 -0.3 -2.0
temperature Glucose defined 30C timecourse1 timepoint 3 N.D. -0.2 -0.4 -0.3 -2.1
carbon source RCH2 defined media N.D. -0.2 -0.2 -0.1 -2.5
stress Benzethonium chloride 0.0125 mM N.D. -0.1 -0.8 +0.2 -2.3
nitrogen source D-Alanine (N) N.D. -0.0 -0.6 -0.5 -1.7
carbon source D,L-Lactate (C) N.D. -0.2 -0.6 -0.5 -1.6
nitrogen source Adenine (N) N.D. +0.1 -0.4 +0.1 -2.5
nitrogen source L-Glutamine (N) N.D. +0.3 +0.0 -0.4 -2.2
stress Def Nalidixic 0.001 mg/ml N.D. -0.2 +0.6 -0.1 -2.3
nitrogen source L-Asparagine (N) N.D. -0.3 +0.3 +0.2 -2.2
stress Chlorate 75 mM N.D. +0.5 +0.6 -0.8 -1.6
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. +0.3 +1.3 +0.4 -3.4
stress 1-ethyl-3-methylimidazolium acetate 20 mM N.D. +0.8 +0.4 -1.0 -0.7
carbon source L-tyrosine (C) N.D. -0.0 +1.6 -1.0 -0.8
stress Cisplatin 0.003 mg/ml N.D. +0.1 -0.5 +0.4 +1.8
stress Bacitracin 0.25 mg/ml N.D. -0.0 -0.0 +0.5 +2.5
stress A22 0.005 mg/ml N.D. +0.1 +0.6 +0.5 +1.8
stress Bacitracin 0.25 mg/ml N.D. +0.3 +0.1 -0.1 +3.0
stress Carbenicillin 0.008 mg/ml N.D. -0.2 +0.1 +0.2 +3.3
stress Carbenicillin 0.008 mg/ml N.D. +0.1 -0.3 -0.3 +3.8
stress Def Vancomycin 0.016 mg/ml N.D. -0.4 +0.6 +0.5 +2.8
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