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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_2319 and Psest_2320 are separated by 74 nucleotides
Psest_2320 and Psest_2321 are separated by 92 nucleotides
Psest_2321 and Psest_2322 overlap by 4 nucleotides
Psest_2322 and Psest_2323 are separated by 171 nucleotides
Psest_2319: Psest_2319 - aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent, at 2,471,353 to 2,473,956
_2319
Psest_2320: Psest_2320 - 2-methylcitrate synthase/citrate synthase II, at 2,474,031 to 2,475,158
_2320
Psest_2321: Psest_2321 - methylisocitrate lyase, at 2,475,251 to 2,476,144
_2321
Psest_2322: Psest_2322 - Transcriptional regulators, at 2,476,141 to 2,476,866
_2322
Psest_2323: Psest_2323 - Uncharacterized protein conserved in archaea, at 2,477,038 to 2,477,670
_2323
Group
Condition
Psest
_2319
Psest
_2320
Psest
_2321
Psest
_2322
Psest
_2323
carbon source
propionate (C)
N.D.
-3.6
-2.7
-2.8
-0.9
carbon source
propionate (C)
N.D.
-3.2
-1.5
-2.4
-0.8
carbon source
L-Isoleucine (C)
N.D.
-4.5
-0.9
-0.9
-0.9
carbon source
L-Isoleucine (C)
N.D.
-3.5
-1.1
-1.3
-0.7
stress
Def Benzethonium chloride 0.008 mM
N.D.
-0.1
-0.0
-0.5
-4.1
carbon source
butyrate (C)
N.D.
-0.3
+0.7
+0.1
-4.1
nitrogen source
Cytosine (N)
N.D.
-0.0
-0.7
-0.5
-2.2
nitrogen source
Cytosine (N)
N.D.
-0.1
-0.2
-0.1
-2.9
stress
nitrate 250 mM
N.D.
-0.3
-0.6
-0.8
-1.4
nitrogen source
L-Glutamine (N)
N.D.
-0.2
-0.5
-0.3
-2.0
temperature
Glucose defined 30C timecourse1 timepoint 3
N.D.
-0.2
-0.4
-0.3
-2.1
carbon source
RCH2 defined media
N.D.
-0.2
-0.2
-0.1
-2.5
stress
Benzethonium chloride 0.0125 mM
N.D.
-0.1
-0.8
+0.2
-2.3
nitrogen source
D-Alanine (N)
N.D.
-0.0
-0.6
-0.5
-1.7
carbon source
D,L-Lactate (C)
N.D.
-0.2
-0.6
-0.5
-1.6
nitrogen source
Adenine (N)
N.D.
+0.1
-0.4
+0.1
-2.5
nitrogen source
L-Glutamine (N)
N.D.
+0.3
+0.0
-0.4
-2.2
stress
Def Nalidixic 0.001 mg/ml
N.D.
-0.2
+0.6
-0.1
-2.3
nitrogen source
L-Asparagine (N)
N.D.
-0.3
+0.3
+0.2
-2.2
stress
Chlorate 75 mM
N.D.
+0.5
+0.6
-0.8
-1.6
stress
Def Benzalkonium Chloride 0.002 mg/ml
N.D.
+0.3
+1.3
+0.4
-3.4
stress
1-ethyl-3-methylimidazolium acetate 20 mM
N.D.
+0.8
+0.4
-1.0
-0.7
carbon source
L-tyrosine (C)
N.D.
-0.0
+1.6
-1.0
-0.8
stress
Cisplatin 0.003 mg/ml
N.D.
+0.1
-0.5
+0.4
+1.8
stress
Bacitracin 0.25 mg/ml
N.D.
-0.0
-0.0
+0.5
+2.5
stress
A22 0.005 mg/ml
N.D.
+0.1
+0.6
+0.5
+1.8
stress
Bacitracin 0.25 mg/ml
N.D.
+0.3
+0.1
-0.1
+3.0
stress
Carbenicillin 0.008 mg/ml
N.D.
-0.2
+0.1
+0.2
+3.3
stress
Carbenicillin 0.008 mg/ml
N.D.
+0.1
-0.3
-0.3
+3.8
stress
Def Vancomycin 0.016 mg/ml
N.D.
-0.4
+0.6
+0.5
+2.8
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