Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2292 and Psest_2293 are separated by 9 nucleotidesPsest_2293 and Psest_2294 are separated by 43 nucleotidesPsest_2294 and Psest_2295 are separated by 585 nucleotidesPsest_2295 and Psest_2296 are separated by 7 nucleotides Psest_2292: Psest_2292 - Cytochrome c2, at 2,444,140 to 2,444,982 _2292 Psest_2293: Psest_2293 - hypothetical protein, at 2,444,992 to 2,445,117 _2293 Psest_2294: Psest_2294 - nitrite reductase, copper-containing, at 2,445,161 to 2,446,540 _2294 Psest_2295: Psest_2295 - Predicted permeases, at 2,447,126 to 2,447,887 _2295 Psest_2296: Psest_2296 - Transcriptional regulators, at 2,447,895 to 2,448,611 _2296
Group Condition Psest_2292 Psest_2293 Psest_2294 Psest_2295 Psest_2296
stress nitrate 250 mM -0.2 -3.2 -0.3 -0.7 -0.6
RCH2 grown on a colony of N2C3 +0.2 -3.6 -0.0 -0.4 -0.6
stress Nalidixic 0.00390625 mg/ml -0.0 -4.0 -0.0 +0.1 +0.1
stress Gentamicin 0.0016 mg/ml -0.3 -2.0 -0.4 -0.4 -0.4
stress Nickel (II) chloride 0.8 mM -0.0 -2.2 -0.0 -0.0 -0.3
stress Lactate-nitrate; anaerobic; copper stress sample3 -0.1 -1.8 -0.1 -0.2 -0.2
stress Lactate-nitrate; anaerobic sample1 -0.2 -1.7 -0.1 -0.2 -0.2
stress Def Carbenicillin 0.008 mg/ml -0.2 -1.4 -0.3 -0.2 -0.3
anaerobic Nitrite/ lactate media with Nitrite 20mM -0.3 -1.9 +0.0 -0.1 -0.1
stress Fusidic 0.016 mg/ml -0.1 -1.7 -0.2 -0.1 -0.2
stress Chlorate 75 mM -0.0 -1.9 -0.0 -0.3 +0.0
lb LB -0.5 -0.7 -0.3 -0.5 -0.2
metal limitation Lactate-nitrite; anaerobic; sample3 -0.1 -1.4 -0.2 -0.2 -0.2
stress 5-Hydroxymethylfurfural 5 mM -0.2 -1.1 +0.2 -0.4 -0.5
stress Polymyxin B sulfate 0.0001 mg/ml -0.1 -1.2 -0.0 -0.5 -0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.2 -1.5 +0.0 -0.1 -0.1
carbon source propionate (C) +0.1 -2.7 -0.0 +0.7 -0.0
stress Lactate-nitrate; anaerobic; copper stress sample1 +0.0 -1.5 -0.1 +0.1 -0.3
stress Lactate-nitrate; anaerobic; cadmium stress sample2 -0.0 -1.6 +0.1 -0.2 -0.1
carbon source L-tyrosine (C) +0.2 -1.8 -0.1 -0.1 +0.0
stress Neomycin 0.004 mg/ml -0.0 -1.8 +0.0 -0.2 +0.3
stress Cisplatin 0.0016 mg/ml +0.0 -1.7 -0.1 -0.0 +0.2
stress 2-Furfuraldehyde 0.05 vol% +0.1 -1.9 +0.1 +0.3 -0.1
carbon source propionate (C) +0.2 -2.5 +0.2 +0.2 +0.5
stress Def Benzalkonium Chloride 0.002 mg/ml +0.5 -1.1 +0.5 +0.4 +0.3
stress Furfuryl Alcohol 0.2 vol% -0.3 +1.5 +0.1 +0.1 +0.2
stress Spectinomycin 0.00625 mg/ml +0.1 +1.1 +0.1 +0.6 -0.2
stress 2-Furfuraldehyde 0.05 vol% +0.1 +1.7 -0.1 +0.2 +0.0
nitrogen source Putrescine (N) +0.2 +1.8 +0.1 +0.0 +0.3
stress Benzethonium chloride 0.01 mM +0.1 +2.2 -0.2 +0.5 +0.0
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