Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2279 and Psest_2280 are separated by 85 nucleotidesPsest_2280 and Psest_2281 overlap by 20 nucleotidesPsest_2281 and Psest_2282 overlap by 8 nucleotidesPsest_2282 and Psest_2283 are separated by 102 nucleotides Psest_2279: Psest_2279 - coenzyme PQQ biosynthesis protein E, at 2,427,544 to 2,428,689 _2279 Psest_2280: Psest_2280 - Predicted membrane protein, at 2,428,775 to 2,429,278 _2280 Psest_2281: Psest_2281 - Phosphoserine aminotransferase, at 2,429,259 to 2,430,359 _2281 Psest_2282: Psest_2282 - Dihydroorotate dehydrogenase, at 2,430,352 to 2,431,197 _2282 Psest_2283: Psest_2283 - Parvulin-like peptidyl-prolyl isomerase, at 2,431,300 to 2,433,156 _2283
Group Condition Psest_2279 Psest_2280 Psest_2281 Psest_2282 Psest_2283
stress Chlorate 75 mM -0.3 -0.2 -0.9 -2.2 N.D.
stress Def Carbenicillin 0.02 mg/ml -0.3 -1.3 -0.7 -0.6 N.D.
stress Thallium(I) acetate 0.09 mg/ml -0.2 -1.0 -0.8 -0.5 N.D.
temperature LB 30C timecourse1 timepoint 3 -0.5 -0.4 -0.5 -0.9 N.D.
stress Nalidixic 0.00390625 mg/ml +0.2 -0.8 -0.1 -1.3 N.D.
stress Aluminum chloride 0.3 mM +0.0 -0.6 -0.7 -0.6 N.D.
stress Gentamicin 0.0016 mg/ml -0.3 -0.8 -0.3 -0.4 N.D.
nitrogen source L-Glutamic (N) -0.2 -0.1 -0.5 -0.9 N.D.
stress D-Cycloserine 0.032 mg/ml +0.0 -1.5 -0.6 +0.6 N.D.
carbon source L-tyrosine (C) +0.2 -0.9 -0.5 -0.0 N.D.
RCH2 grown on a colony of N2C3 +0.1 -0.8 -0.7 +0.2 N.D.
anaerobic Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten -0.0 -1.4 +0.3 +0.2 N.D.
carbon source propionate (C) +0.1 -0.5 +0.4 -0.8 N.D.
stress Lactate-nitrate; anaerobic; copper stress sample1 -0.1 -0.9 -0.2 +0.7 N.D.
stress Lactate-nitrate; anaerobic; cobalt stress sample1 -0.2 -1.1 +0.2 +0.6 N.D.
radiation Ionizing radiation, 319.06 Gy, -0.0 -0.8 -0.2 +1.1 N.D.
stress Lactate-nitrate; anaerobic; copper stress sample2 -0.3 -1.3 +0.5 +1.2 N.D.
stress Benzethonium chloride 0.0125 mM -0.2 +0.4 -0.6 +0.7 N.D.
RCH2 grown on a colony of N2F3 -0.2 +0.4 -0.6 +1.0 N.D.
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample1 +0.1 -0.6 -0.3 +1.3 N.D.
vitamin No vitamins t2 -0.1 +0.6 -0.5 +0.6 N.D.
stress Def 2-Furfuraldehyde 0.032 vol% +0.4 -0.9 -0.3 +1.5 N.D.
stress Polymyxin B sulfate 0.0001 mg/ml +0.1 +0.2 -0.4 +1.0 N.D.
radiation Ionizing radiation, 319.06 Gy, +0.1 +0.6 -0.3 +0.8 N.D.
carbon source propionate (C) +0.2 +0.1 -0.1 +1.3 N.D.
stress Choline chloride 90 mM +0.4 +0.6 +0.1 +0.6 N.D.
RCH2 grown on a colony of Serratia +0.2 -0.0 -0.1 +1.6 N.D.
stress Benzethonium chloride 0.01 mM +0.2 +1.0 +0.3 +0.3 N.D.
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.1 +0.4 +0.0 +1.4 N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml +0.4 +0.2 +0.4 +0.8 N.D.
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