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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2247 and Psest_2248 are separated by 13 nucleotides
Psest_2248 and Psest_2249 are separated by 10 nucleotides
Psest_2249 and Psest_2250 are separated by 196 nucleotides
Psest_2250 and Psest_2251 are separated by 48 nucleotides
Psest_2247: Psest_2247 - Protein-tyrosine-phosphatase, at 2,397,740 to 2,398,240
_2247
Psest_2248: Psest_2248 - Predicted transcriptional regulators, at 2,398,254 to 2,398,610
_2248
Psest_2249: Psest_2249 - Protein-tyrosine-phosphatase, at 2,398,621 to 2,399,034
_2249
Psest_2250: Psest_2250 - Predicted flavoprotein involved in K+ transport, at 2,399,231 to 2,400,313
_2250
Psest_2251: Psest_2251 - arsenical-resistance protein, at 2,400,362 to 2,401,441
_2251
Group
Condition
Psest
_2247
Psest
_2248
Psest
_2249
Psest
_2250
Psest
_2251
stress
nitrate 250 mM
-1.0
-0.6
-1.6
+0.3
-0.4
stress
Benzalkonium Chloride 0.002 mg/ml
-0.4
-0.8
-0.7
-0.6
+0.1
stress
Gentamicin 0.0016 mg/ml
-0.1
-0.5
-1.1
-0.3
-0.1
stress
Paraquat dichloride 0.015 mg/ml
+0.2
-1.4
-0.0
-0.4
-0.3
stress
Fusidic 0.016 mg/ml
-0.2
-0.7
-0.4
-0.4
-0.2
stress
Lactate-nitrate; anaerobic; copper stress sample1
-0.2
-1.3
+0.2
-0.3
-0.1
nitrogen source
Putrescine (N)
-0.1
-1.4
-0.3
-0.2
+0.1
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.0
-0.8
-0.7
-0.0
-0.2
stress
Def Benzethonium chloride 0.008 mM
-0.3
-0.4
-0.4
-0.6
-0.1
nutrient
L-tyrosine
+0.1
-1.0
-0.1
-0.2
-0.3
stress
Def Carbenicillin 0.008 mg/ml
-0.2
-1.2
-0.2
+0.0
+0.1
anaerobic
Nitrate/ lactate media with Nitrate 250mM
-0.2
-1.3
+0.1
-0.2
+0.3
stress
L-Lysine 200 mM
+0.1
-1.2
-0.1
-0.2
+0.2
RCH2 grown on a colony of N2F3
+0.3
-0.2
+0.1
-0.9
-0.3
stress
Lactate-nitrate; anaerobic; cadmium stress sample1
-0.3
-1.0
+0.3
+0.0
+0.0
stress
Nalidixic 0.00390625 mg/ml
-0.2
-1.5
+0.2
+0.4
+0.4
stress
Neomycin 0.004 mg/ml
+0.2
-0.7
+0.7
-0.1
-0.2
stress
Def 2-Furfuraldehyde 0.032 vol%
+0.4
+0.5
-0.3
-0.6
-0.1
stress
Furfuryl Alcohol 0.05 vol%
+0.2
-0.7
+0.2
+0.6
-0.1
stress
Fusidic 0.016 mg/ml
+0.2
-0.5
-0.3
+0.9
+0.0
stress
Nickel (II) chloride 0.8 mM
-0.6
+0.4
+0.2
+0.3
+0.2
temperature
LB 30C timecourse1 timepoint 1
+0.3
+0.8
+0.0
-0.5
-0.1
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample3
-0.1
+0.8
+0.2
-0.6
+0.2
stress
Lactate-nitrate; anaerobic sample3
-0.4
+0.5
+0.7
-0.1
-0.1
RCH2 grown on a colony of N2F3
+0.8
+0.3
-0.0
+0.1
-0.4
stress
Cisplatin 0.0016 mg/ml
-0.1
+0.5
-0.4
+0.6
+0.2
carbon source
propionate (C)
-0.4
+0.5
+0.0
+0.6
+0.3
stress
Spectinomycin 0.00625 mg/ml
+0.2
+1.3
-0.1
+0.1
-0.2
RCH2 grown on a colony of Serratia
+0.4
+0.3
+0.5
+0.2
+0.3
stress
perchlorate 25 mM
+0.1
+0.6
+0.3
+0.5
+0.3
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