Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2186 and Psest_2187 overlap by 4 nucleotidesPsest_2187 and Psest_2188 are separated by 171 nucleotidesPsest_2188 and Psest_2189 are separated by 157 nucleotidesPsest_2189 and Psest_2190 are separated by 388 nucleotides Psest_2186: Psest_2186 - Protein of unknown function (DUF1656)., at 2,343,364 to 2,343,567 _2186 Psest_2187: Psest_2187 - Predicted membrane protein, at 2,343,564 to 2,345,624 _2187 Psest_2188: Psest_2188 - AraC-type DNA-binding domain-containing proteins, at 2,345,796 to 2,346,731 _2188 Psest_2189: Psest_2189 - DASH complex subunit Dad3., at 2,346,889 to 2,347,119 _2189 Psest_2190: Psest_2190 - hypothetical protein, at 2,347,508 to 2,347,720 _2190
Group Condition Psest_2186 Psest_2187 Psest_2188 Psest_2189 Psest_2190
stress benzoic 0.4 mg/ml -1.3 -1.4 -1.1 N.D. N.D.
stress benzoic 0.4 mg/ml -0.8 -0.8 -0.9 N.D. N.D.
stress Polymyxin B sulfate 0.0001 mg/ml -0.9 -0.7 -0.4 N.D. N.D.
stress Nalidixic 0.00390625 mg/ml -0.4 -0.8 -0.7 N.D. N.D.
RCH2 grown on a colony of Serratia -0.9 -0.4 -0.4 N.D. N.D.
stress benzoic 0.4 mg/ml -0.4 -0.5 -0.6 N.D. N.D.
stress Anaerobic 500 uM Zinc chloride sample3 -0.4 -0.4 -0.7 N.D. N.D.
metal limitation Anaerobic, no Mo, no W, sample1 -0.5 -0.3 -0.7 N.D. N.D.
stress nitrate 200 mM -0.6 -0.1 -0.7 N.D. N.D.
carbon source Anaerobic, Glucose Nitrate sample3 -0.4 -0.2 -0.7 N.D. N.D.
anaerobic Nitrate/ lactate media with Nitrate 20mM -0.6 -0.0 -0.6 N.D. N.D.
stress Nalidixic 0.00390625 mg/ml -0.3 -0.3 -0.7 N.D. N.D.
anaerobic Lactate Nitrate anaerobic no yeast extract sample3 -0.3 -0.3 -0.7 N.D. N.D.
metal limitation Anaerobic, no iron sample2 -0.6 -0.2 -0.4 N.D. N.D.
stress Paraquat dichloride 0.015 mg/ml -0.4 -0.3 -0.6 N.D. N.D.
carbon source Anaerobic, Glucose Nitrate sample2 -0.5 -0.2 -0.5 N.D. N.D.
metal limitation Anaerobic, no Mo, no W, sample3 -0.3 -0.4 -0.5 N.D. N.D.
vitamin With vitamins t1 -0.8 -0.1 -0.3 N.D. N.D.
stress Anaerobic 50 uM Lead (II) nitrate sample1 -0.4 -0.2 -0.5 N.D. N.D.
stress Anaerobic 500 uM Zinc chloride sample1 -0.2 -0.4 -0.6 N.D. N.D.
lb LB -0.5 -0.1 -0.6 N.D. N.D.
stress Chlorate 75 mM -0.6 +0.1 -0.5 N.D. N.D.
RCH2 grown on a colony of ecoli +0.2 -0.6 -0.4 N.D. N.D.
stress nitrate 250 mM +0.3 -1.0 -0.0 N.D. N.D.
stress 1-ethyl-3-methylimidazolium acetate 40 mM -0.6 +0.4 -0.3 N.D. N.D.
RCH2 grown on a colony of N2F3 +0.2 +0.4 -0.8 N.D. N.D.
stress Def Carbenicillin 0.008 mg/ml +0.9 -0.4 -0.0 N.D. N.D.
carbon source propionate (C) +0.8 -0.1 -0.2 N.D. N.D.
stress Def Carbenicillin 0.02 mg/ml +1.1 -0.2 +0.1 N.D. N.D.
nitrogen source nitrite (N) +1.0 +0.3 +0.1 N.D. N.D.
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