Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2168 and Psest_2169 are separated by 22 nucleotidesPsest_2169 and Psest_2170 overlap by 4 nucleotidesPsest_2170 and Psest_2171 overlap by 4 nucleotidesPsest_2171 and Psest_2172 are separated by 12 nucleotides Psest_2168: Psest_2168 - Protein of unknown function (DUF2934)., at 2,321,821 to 2,322,150 _2168 Psest_2169: Psest_2169 - malto-oligosyltrehalose synthase, at 2,322,173 to 2,324,959 _2169 Psest_2170: Psest_2170 - 4-alpha-glucanotransferase, at 2,324,956 to 2,327,031 _2170 Psest_2171: Psest_2171 - malto-oligosyltrehalose trehalohydrolase, at 2,327,028 to 2,328,803 _2171 Psest_2172: Psest_2172 - glycogen/starch synthases, ADP-glucose type, at 2,328,816 to 2,330,366 _2172
Group Condition Psest_2168 Psest_2169 Psest_2170 Psest_2171 Psest_2172
nitrogen source L-Isoleucine (N) N.D. -0.5 -0.7 -0.5 -0.5
nitrogen source Putrescine (N) N.D. -0.2 -0.5 -0.3 -0.6
stress A22 0.005 mg/ml N.D. -0.7 -0.5 -0.2 -0.1
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. -0.2 +0.1 -0.8 -0.4
lb LB N.D. -0.5 -0.3 -0.3 -0.2
RCH2 grown on a colony of N2C3 N.D. -0.3 -0.4 -0.1 -0.4
stress Carbenicillin 0.0065 mg/ml N.D. -0.0 -0.2 -0.6 -0.3
stress L-Lysine 200 mM N.D. -0.3 -0.6 -0.1 -0.3
carbon source D-Maltose (C) N.D. -0.2 -0.6 -0.1 -0.4
nitrogen source L-Isoleucine (N) N.D. +0.2 -0.2 -0.3 -0.5
stress D-Cycloserine 0.032 mg/ml N.D. +0.3 -0.7 -0.1 -0.2
stress Cobalt chloride 0.07 mM N.D. -0.2 -0.7 -0.1 +0.2
stress Polymyxin B sulfate 0.0001 mg/ml N.D. -0.6 -0.2 +0.3 -0.2
RCH2 grown on a colony of ecoli N.D. +0.1 -0.6 +0.3 -0.2
stress nitrate 250 mM N.D. +0.3 +0.3 -0.5 -0.3
stress Doxycycline hyclate 0.0002 mg/ml N.D. +0.1 +0.4 -0.5 -0.2
nitrogen source L-Isoleucine (N) N.D. +0.4 +0.3 -0.1 -0.5
carbon source L-tyrosine (C) N.D. -0.1 -0.4 +0.2 +0.4
stress Def Cephalothin 0.04 mg/ml N.D. +0.3 -0.5 +0.1 +0.5
stress Def Carbenicillin 0.02 mg/ml N.D. +0.7 -0.7 +0.2 +0.3
stress Benzethonium chloride 0.01 mM N.D. +0.3 +0.7 -0.3 -0.0
stress nitrate 200 mM N.D. +0.4 +0.6 -0.1 -0.3
stress Def Carbenicillin 0.008 mg/ml N.D. +0.6 +0.5 -0.3 +0.1
stress Chlorate 75 mM N.D. +0.7 +0.5 +0.0 -0.2
nitrogen source Putrescine (N) N.D. +0.4 +0.1 +0.2 +0.5
nitrogen source Parabanic Acid (N) N.D. +0.2 +0.4 +0.3 +0.2
temperature LB 30C timecourse1 timepoint 1 N.D. +0.3 +0.5 +0.3 +0.1
stress Nickel (II) chloride 0.8 mM N.D. +0.5 +0.4 +0.3 +0.1
stress perchlorate 25 mM N.D. +0.5 +0.4 +0.2 +0.2
RCH2 grown on a colony of N2A2 N.D. -0.0 +0.7 +0.4 +0.2
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