Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_2154 and Psest_2155 are separated by 10 nucleotidesPsest_2155 and Psest_2156 are separated by 347 nucleotidesPsest_2156 and Psest_2157 are separated by 135 nucleotidesPsest_2157 and Psest_2158 overlap by 8 nucleotides Psest_2154: Psest_2154 - formate dehydrogenase accessory protein FdhE, at 2,301,947 to 2,302,894 _2154 Psest_2155: Psest_2155 - hypothetical protein, at 2,302,905 to 2,303,069 _2155 Psest_2156: Psest_2156 - Glycosidases, at 2,303,417 to 2,305,429 _2156 Psest_2157: Psest_2157 - trehalose synthase, at 2,305,565 to 2,308,891 _2157 Psest_2158: Psest_2158 - alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase, at 2,308,884 to 2,311,097 _2158
Group Condition Psest_2154 Psest_2155 Psest_2156 Psest_2157 Psest_2158
carbon source D-Maltose (C) -0.4 N.D. -1.0 +0.4 -3.6
carbon source D-Maltose (C) -0.2 N.D. -0.8 +0.4 -3.7
carbon source D-Maltose (C) -0.2 N.D. -0.8 +0.4 -3.4
carbon source propionate (C) -0.9 N.D. -0.6 -0.2 -2.1
nitrogen source L-Valine (N) -0.7 N.D. -0.1 +0.1 -1.9
carbon source propionate (C) +0.3 N.D. -0.5 -0.1 -2.2
nitrogen source Glycine (N) -0.4 N.D. -0.4 +0.0 -1.4
nitrogen source nitrite (N) +0.0 N.D. -0.7 -0.1 -1.1
nitrogen source Cytosine (N) -0.4 N.D. -0.4 -0.2 -1.0
nitrogen source nitrate (N) +0.1 N.D. -0.8 -0.2 -1.0
stress Furfuryl Alcohol 0.05 vol% -0.6 N.D. -0.5 -0.3 -0.4
nitrogen source Putrescine (N) -0.2 N.D. -0.0 -0.0 -1.4
RCH2 grown on a colony of N2F3 -0.3 N.D. -0.3 -0.2 -0.8
nitrogen source L-Citrulline (N) -0.3 N.D. -0.4 +0.2 -1.1
nitrogen source L-Valine (N) -0.0 N.D. +0.3 +0.0 -1.9
nitrogen source L-Isoleucine (N) -0.1 N.D. -0.2 +0.1 -1.3
nitrogen source D-Alanine (N) +0.1 N.D. -0.7 -0.1 -0.9
stress Nickel (II) chloride 1 mM -0.6 N.D. -0.2 +0.1 -0.8
stress Def Benzalkonium Chloride 0.002 mg/ml +0.2 N.D. -0.6 -0.3 -0.6
nitrogen source Glycine (N) +0.3 N.D. -0.1 +0.1 -1.4
nitrogen source nitrate (N) +0.2 N.D. -0.4 +0.2 -0.9
nitrogen source nitrite (N) +0.5 N.D. -0.7 -0.0 -0.6
nitrogen source L-Alanine (N) +0.1 N.D. +0.4 +0.2 -1.4
stress Choline Lysine 20 mM +0.6 N.D. -0.3 -0.2 -0.6
stress Def Neomycin 0.0008 mg/ml +0.6 N.D. -0.3 +0.0 -0.8
nitrogen source Putrescine (N) +0.4 N.D. -0.0 +0.2 -1.0
nitrogen source nitrite (N) +0.6 N.D. -0.2 +0.1 -0.9
stress Def Nalidixic 0.001 mg/ml +0.6 N.D. +0.3 +0.3 -0.5
stress Def Chloride 400 mM +0.7 N.D. +0.9 +0.1 +0.1
RCH2 grown on a colony of Serratia +1.3 N.D. +0.5 +0.2 -0.0
remove
Psest_2154
plot		 remove
Psest_2155
plot		 remove
Psest_2156		 remove
Psest_2157
plot		 remove
Psest_2158
plot