Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2144 and Psest_2145 are separated by 99 nucleotidesPsest_2145 and Psest_2146 are separated by 229 nucleotidesPsest_2146 and Psest_2147 are separated by 262 nucleotidesPsest_2147 and Psest_2148 are separated by 106 nucleotides Psest_2144: Psest_2144 - The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family, at 2,287,076 to 2,290,246 _2144 Psest_2145: Psest_2145 - RND family efflux transporter, MFP subunit, at 2,290,346 to 2,291,575 _2145 Psest_2146: Psest_2146 - Transcriptional regulator, at 2,291,805 to 2,292,722 _2146 Psest_2147: Psest_2147 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 2,292,985 to 2,294,001 _2147 Psest_2148: Psest_2148 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,294,108 to 2,294,965 _2148
Group Condition Psest_2144 Psest_2145 Psest_2146 Psest_2147 Psest_2148
stress Nalidixic 0.00390625 mg/ml -1.3 -1.5 -2.0 N.D. -0.8
stress Nalidixic 0.00390625 mg/ml -1.0 -1.3 -1.6 N.D. +0.1
stress nitrite 2.5 mM +0.0 -0.2 +0.1 N.D. -1.6
stress syringaldehyde 3 mM -0.0 +0.2 -0.5 N.D. -1.2
stress 5-Hydroxymethylfurfural 5 mM -0.5 -0.3 -0.3 N.D. -0.5
RCH2 grown on a colony of N2C3 -0.8 -0.5 -0.7 N.D. +0.4
stress Fusidic 0.016 mg/ml +0.1 +0.0 -1.0 N.D. -0.7
carbon source L-tyrosine (C) +0.1 -0.5 -1.0 N.D. -0.1
anaerobic Nitrate/ lactate media with Nitrate 50mM -0.1 +0.3 -0.8 N.D. -0.6
nitrogen source L-Alanine (N) -0.5 -0.3 -0.7 N.D. +0.3
stress Def 2-Furfuraldehyde 0.032 vol% +0.1 +0.2 -1.0 N.D. -0.3
stress Benzethonium chloride 0.0125 mM +0.1 +0.2 +0.2 N.D. -1.4
stress Furfuryl Alcohol 0.2 vol% -0.0 -0.5 -1.0 N.D. +0.7
stress Furfuryl Alcohol 0.3 vol% -0.0 -0.1 -1.1 N.D. +0.4
carbon source propionate (C) +0.4 +0.3 -0.2 N.D. -0.8
RCH2 grown on a colony of N2A2 +0.1 +0.6 -0.0 N.D. -0.9
stress 2-Furfuraldehyde 0.05 vol% +0.4 +0.4 -0.2 N.D. -0.7
stress Benzalkonium Chloride 0.002 mg/ml +0.3 -0.4 -0.6 N.D. +0.6
stress Chlorate 75 mM +0.6 +0.5 -0.0 N.D. -1.0
anaerobic Nitrate/ lactate media with Nitrate 250mM -0.0 +0.5 +0.6 N.D. -0.8
RCH2 grown on a colony of N2F3 -0.3 -0.2 +0.3 N.D. +1.3
stress Polymyxin B sulfate 0.0001 mg/ml +0.2 -0.0 -0.2 N.D. +1.2
stress Furfuryl Alcohol 0.05 vol% +0.4 +0.4 -0.3 N.D. +0.9
temperature LB 30C timecourse1 timepoint 1 +0.5 +0.3 +0.6 N.D. +0.3
stress Cephalothin 0.04 mg/ml +0.2 +0.5 -0.0 N.D. +1.0
metal limitation Lactate-nitrite with YE; anaerobic; sample2 +0.2 +0.2 +0.6 N.D. +0.8
lb LB +0.2 +0.1 +0.5 N.D. +0.8
stress Fusidic 0.016 mg/ml +0.4 +0.6 +0.1 N.D. +0.6
stress Lactate-nitrate; anaerobic; cadmium stress sample2 +0.2 +0.2 +0.3 N.D. +1.0
RCH2 grown on a colony of 8R2A +0.1 -0.1 +0.3 N.D. +1.5
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