Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2137 and Psest_2138 are separated by 284 nucleotidesPsest_2138 and Psest_2139 overlap by 4 nucleotidesPsest_2139 and Psest_2140 are separated by 28 nucleotidesPsest_2140 and Psest_2141 overlap by 4 nucleotides Psest_2137: Psest_2137 - Uncharacterized membrane protein, putative virulence factor, at 2,273,746 to 2,275,212 _2137 Psest_2138: Psest_2138 - RND family efflux transporter, MFP subunit, at 2,275,497 to 2,276,738 _2138 Psest_2139: Psest_2139 - Cation/multidrug efflux pump, at 2,276,735 to 2,279,815 _2139 Psest_2140: Psest_2140 - Cation/multidrug efflux pump, at 2,279,844 to 2,282,948 _2140 Psest_2141: Psest_2141 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 2,282,945 to 2,284,432 _2141
Group Condition Psest_2137 Psest_2138 Psest_2139 Psest_2140 Psest_2141
stress Bacitracin 0.25 mg/ml N.D. -4.9 -4.6 -4.0 -4.0
stress Bacitracin 0.25 mg/ml N.D. -3.9 -4.5 -4.5 -4.4
stress Chlorite 0.06 mM N.D. -1.7 -1.6 -1.4 -2.7
stress Def Carbenicillin 0.008 mg/ml N.D. -1.7 -1.4 -1.1 -0.8
stress nitrate 250 mM N.D. -1.7 -1.3 -0.2 -1.3
stress Fusidic 0.016 mg/ml N.D. -1.3 -1.4 -0.9 -0.5
stress L-Lysine 200 mM N.D. -1.6 -0.9 -0.9 -0.5
stress L-Lysine 200 mM N.D. -0.9 -0.9 -0.9 -0.7
carbon source L-tyrosine (C) N.D. +0.2 -0.9 -0.7 -1.8
stress Def 2-Furfuraldehyde 0.032 vol% N.D. -1.7 -0.6 -0.3 -0.3
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. -0.7 -1.0 -0.5 -0.7
carbon source L-tyrosine (C) N.D. -0.7 -0.8 -1.0 -0.2
stress Nalidixic 0.00390625 mg/ml N.D. -1.5 -0.3 -0.4 -0.3
stress Fusidic 0.016 mg/ml N.D. -1.0 -0.4 -0.5 -0.5
stress Fusidic 0.016 mg/ml N.D. -0.6 -0.5 -0.7 -0.6
stress Benzalkonium Chloride 0.002 mg/ml N.D. -0.5 -0.7 -0.7 -0.5
stress A22 0.005 mg/ml N.D. -0.9 -0.5 -0.4 -0.5
stress Def Carbenicillin 0.02 mg/ml N.D. -0.4 -0.9 -0.6 -0.4
stress Gentamicin 0.0016 mg/ml N.D. -0.9 -0.7 -0.3 -0.2
stress Carbenicillin 0.008 mg/ml N.D. -0.8 -0.0 -0.8 -0.5
stress Nalidixic 0.001 mg/ml N.D. -0.6 -0.5 -0.5 -0.6
stress Cephalothin 0.04 mg/ml N.D. -0.8 -0.7 -0.3 -0.1
stress Vanillin 2 mM N.D. -1.2 -0.2 +0.0 +0.7
nitrogen source L-Glutamic (N) N.D. +0.7 +0.3 +0.4 +0.5
metal limitation Lactate; aerobic; sample1 N.D. +0.8 +0.3 +0.4 +0.5
metal limitation Lactate; aerobic; with copper, sample1 N.D. +0.7 +0.5 +0.5 +0.4
metal limitation Lactate; aerobic; with copper, sample3 N.D. +0.9 +0.5 +0.3 +0.4
metal limitation Aerobic, with iron sample3 N.D. +0.5 +0.4 +0.4 +0.8
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample3 N.D. +1.6 -0.0 +0.3 +0.4
metal limitation Aerobic, with iron sample2 N.D. +0.5 +0.6 +0.7 +1.0
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