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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2134 and Psest_2135 are separated by 87 nucleotides
Psest_2135 and Psest_2136 are separated by 271 nucleotides
Psest_2136 and Psest_2137 are separated by 110 nucleotides
Psest_2137 and Psest_2138 are separated by 284 nucleotides
Psest_2134: Psest_2134 - amino acid carrier protein, at 2,270,200 to 2,271,543
_2134
Psest_2135: Psest_2135 - Peroxiredoxin, at 2,271,631 to 2,272,131
_2135
Psest_2136: Psest_2136 - Predicted homoserine dehydrogenase, at 2,272,403 to 2,273,635
_2136
Psest_2137: Psest_2137 - Uncharacterized membrane protein, putative virulence factor, at 2,273,746 to 2,275,212
_2137
Psest_2138: Psest_2138 - RND family efflux transporter, MFP subunit, at 2,275,497 to 2,276,738
_2138
Group
Condition
Psest
_2134
Psest
_2135
Psest
_2136
Psest
_2137
Psest
_2138
stress
Bacitracin 0.25 mg/ml
-1.3
+0.0
+0.3
N.D.
-4.9
stress
Bacitracin 0.25 mg/ml
-1.4
+0.0
+0.3
N.D.
-3.9
RCH2 grown on a colony of N2F3
-1.4
-0.6
-1.4
N.D.
-0.2
stress
Furfuryl Alcohol 0.05 vol%
-1.4
-0.5
-0.8
N.D.
-0.4
nitrogen source
D-Alanine (N)
-3.2
-0.0
+0.6
N.D.
-0.2
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.1
-0.9
+0.4
N.D.
-1.7
nitrogen source
D-Alanine (N)
-3.2
+0.3
+0.6
N.D.
-0.1
carbon source
propionate (C)
+0.5
-0.1
-2.7
N.D.
+0.1
nitrogen source
D-Alanine (N)
-2.5
-0.2
+0.2
N.D.
+0.3
stress
Chlorite 0.06 mM
+0.8
-0.1
-0.3
N.D.
-1.7
stress
Def Cephalothin 0.04 mg/ml
+0.9
-0.4
-1.4
N.D.
-0.2
RCH2 grown on a colony of N2F3
-0.9
+1.1
-1.7
N.D.
+0.6
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample3
-0.0
-0.6
-1.0
N.D.
+1.6
nitrogen source
L-Alanine (N)
-1.2
-0.0
+1.5
N.D.
-0.2
stress
nitrate 250 mM
+0.9
+0.5
+0.4
N.D.
-1.7
nitrogen source
L-Citrulline (N)
+0.2
-0.7
+1.8
N.D.
-1.0
carbon source
L-tyrosine (C)
-0.6
+0.2
+2.1
N.D.
-0.7
nitrogen source
L-Glutamic (N)
+0.0
-0.3
+2.2
N.D.
-0.5
stress
Cephalothin 0.04 mg/ml
+1.5
+0.2
+0.6
N.D.
-0.8
carbon source
L-tyrosine (C)
-0.9
+0.5
+2.2
N.D.
+0.2
nitrogen source
L-Isoleucine (N)
-0.0
+0.4
+2.5
N.D.
-0.2
nitrogen source
L-Valine (N)
-0.2
+0.1
+3.2
N.D.
-0.4
nitrogen source
L-Citrulline (N)
-0.1
-0.1
+3.0
N.D.
-0.0
radiation
Ionizing radiation, 319.06 Gy,
-0.0
+1.3
+1.1
N.D.
+0.6
nitrogen source
L-Valine (N)
-0.3
+0.2
+3.0
N.D.
+0.2
carbon source
Ethanol (C)
+0.2
+0.0
+2.8
N.D.
+0.3
stress
Def Chloride 400 mM
+0.9
+0.9
+1.7
N.D.
-0.0
stress
Def Thallium(I) acetate 0.125 mg/ml
+0.7
+0.7
+1.9
N.D.
+0.4
carbon source
Ethanol (C)
+0.1
+0.3
+2.7
N.D.
+0.8
nitrogen source
L-Isoleucine (N)
-0.2
+0.5
+3.5
N.D.
+0.4
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