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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2131 and Psest_2132 are separated by 63 nucleotides
Psest_2132 and Psest_2133 are separated by 8 nucleotides
Psest_2133 and Psest_2134 are separated by 475 nucleotides
Psest_2134 and Psest_2135 are separated by 87 nucleotides
Psest_2131: Psest_2131 - Acetyltransferases, at 2,263,534 to 2,264,169
_2131
Psest_2132: Psest_2132 - Outer membrane protein, at 2,264,233 to 2,266,047
_2132
Psest_2133: Psest_2133 - Uncharacterized protein conserved in bacteria, at 2,266,056 to 2,269,724
_2133
Psest_2134: Psest_2134 - amino acid carrier protein, at 2,270,200 to 2,271,543
_2134
Psest_2135: Psest_2135 - Peroxiredoxin, at 2,271,631 to 2,272,131
_2135
Group
Condition
Psest
_2131
Psest
_2132
Psest
_2133
Psest
_2134
Psest
_2135
stress
nitrate 200 mM
-0.4
-2.3
-2.5
-0.2
-0.6
stress
Bacitracin 0.25 mg/ml
-0.7
-1.6
-1.9
-1.3
+0.0
stress
nitrate 200 mM
+0.5
-2.0
-2.4
-0.2
-0.8
stress
Furfuryl Alcohol 0.05 vol%
-0.9
-0.9
-1.0
-1.4
-0.5
stress
Bacitracin 0.25 mg/ml
+0.1
-1.9
-1.5
-1.4
+0.0
stress
Nickel (II) chloride 0.8 mM
+0.1
-1.6
-2.0
-0.7
-0.4
carbon source
L-tyrosine (C)
-0.8
-1.7
-1.6
-0.9
+0.5
stress
nitrate 250 mM
-0.6
-2.7
-2.1
+0.9
+0.5
carbon source
L-tyrosine (C)
-0.8
-1.3
-1.5
-0.6
+0.2
nitrogen source
D-Alanine (N)
-0.4
-0.6
-0.3
-2.5
-0.2
stress
Cobalt chloride 0.06 mM
+0.2
-1.1
-1.4
-1.1
-0.5
nitrogen source
D-Alanine (N)
-0.1
-0.2
+0.0
-3.2
-0.0
carbon source
L-Alanine (C)
-0.8
-0.5
-0.9
-0.5
-0.6
nitrogen source
D-Alanine (N)
-0.3
-0.1
+0.0
-3.2
+0.3
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.9
-0.6
-0.4
-0.7
-0.6
stress
Vanillin 2 mM
+0.0
-0.8
-1.0
-0.7
-0.6
stress
Def 2-Furfuraldehyde 0.032 vol%
-1.0
-0.6
-0.3
-0.1
-0.9
nitrogen source
L-Alanine (N)
-0.1
-0.9
-0.7
-1.2
-0.0
RCH2 grown on a colony of N2F3
-0.6
-0.2
-0.0
-1.4
-0.6
carbon source
L-Alanine (C)
-0.3
-0.8
-0.6
-0.3
-0.7
stress
Vancomycin 0.016 mg/ml
+0.2
-1.3
-1.6
+0.5
-0.5
nitrogen source
L-Alanine (N)
-0.2
-0.8
-0.5
-1.2
+0.4
stress
Vancomycin 0.016 mg/ml
+0.3
-1.3
-1.2
+0.1
-0.0
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.8
-1.0
-1.0
-1.1
+0.5
stress
Chlorate 75 mM
+0.4
-1.3
-0.8
+0.2
-0.2
stress
Cephalothin 0.04 mg/ml
-0.1
-0.7
-0.6
+1.5
+0.2
RCH2 grown on a colony of N2F3
+1.2
+0.2
+0.4
-0.9
+1.1
stress
Paraquat dichloride 0.015 mg/ml
+0.2
+1.3
+1.4
-0.6
+0.1
stress
Paraquat dichloride 0.015 mg/ml
-0.2
+1.4
+1.6
-0.5
+0.4
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.7
+0.1
+0.1
+0.0
+1.9
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