Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2122 and Psest_2123 are separated by 176 nucleotidesPsest_2123 and Psest_2124 are separated by 51 nucleotidesPsest_2124 and Psest_2125 are separated by 61 nucleotidesPsest_2125 and Psest_2126 are separated by 58 nucleotides Psest_2122: Psest_2122 - Parvulin-like peptidyl-prolyl isomerase, at 2,253,619 to 2,253,897 _2122 Psest_2123: Psest_2123 - fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data), at 2,254,074 to 2,255,204 _2123 Psest_2124: Psest_2124 - D-gluconate TRAP transporter, large permease component (from data), at 2,255,256 to 2,256,533 _2124 Psest_2125: Psest_2125 - D-gluconate TRAP transporter, periplasmic component (from data), at 2,256,595 to 2,257,611 _2125 Psest_2126: Psest_2126 - Transcriptional regulators, at 2,257,670 to 2,258,689 _2126
Group Condition Psest_2122 Psest_2123 Psest_2124 Psest_2125 Psest_2126
carbon source D-Gluconic Acid (C) +0.2 -5.6 -4.8 -4.4 +3.0
carbon source D-Gluconic Acid (C) -0.7 -4.4 -4.0 -5.4 +3.6
carbon source L-Alanine (C) -2.1 -4.3 -0.2 -0.5 +0.3
RCH2 grown on a colony of N2F3 -4.0 -0.1 -0.4 -0.5 -1.3
stress Benzethonium chloride 0.0125 mM -2.1 -3.2 -0.1 +0.4 -0.2
stress methylglyoxal 0.0016 vol% -2.0 -2.8 -0.2 -0.2 +0.3
RCH2 grown on a colony of ecoli -1.2 -0.3 -0.5 +0.3 -3.1
RCH2 grown on a colony of ecoli -0.6 +0.2 +0.1 +0.4 -4.1
RCH2 grown on a colony of 8R2A -1.3 -1.2 -0.4 -0.1 -0.8
stress Def Chloride 400 mM -1.7 -2.2 +0.3 +0.2 -0.1
stress Def Carbenicillin 0.008 mg/ml -2.9 -0.3 +0.1 -0.1 -0.2
stress Cobalt chloride 0.05 mM -1.0 -2.3 -0.4 +0.0 +0.3
stress Furfuryl Alcohol 0.05 vol% -1.1 -2.2 -0.1 -0.1 +0.4
stress 1-ethyl-3-methylimidazolium acetate 20 mM -2.5 -0.2 -0.5 -0.1 +0.5
stress Fusidic 0.016 mg/ml -0.7 -2.0 +0.3 +0.0 -0.5
nitrogen source L-Glutamine (N) -1.6 -1.9 +0.3 +0.1 +0.5
RCH2 grown on a colony of Serratia -1.2 +1.1 -0.4 -0.3 -1.4
stress Vanillin 2 mM -1.1 -1.1 +0.5 +0.3 -0.4
stress Gentamicin 0.0016 mg/ml +0.4 -2.5 +0.1 -0.0 +0.3
carbon source propionate (C) -2.7 +0.7 -0.0 -0.1 +0.7
lb LB -2.3 +0.6 +0.2 -0.1 +0.3
RCH2 grown on a colony of Serratia +0.8 -0.1 -0.3 +0.5 -2.0
nutrient Min media with glucose +1.0 -2.3 +0.2 -0.0 +0.1
carbon source propionate (C) -2.5 +1.1 -0.2 +0.2 +0.4
temperature LB 30C timecourse1 timepoint 1 -2.1 +1.1 -0.1 +0.1 +0.2
stress Cobalt chloride 0.05 mM +1.0 -1.7 -0.1 -0.2 +0.4
nitrogen source L-Glutamic (N) -1.8 +1.7 +0.2 -0.1 +0.5
nitrogen source L-Valine (N) +1.2 -1.0 +0.5 -0.2 +0.6
nitrogen source Putrescine (N) +2.0 -0.9 +0.5 -0.1 +0.5
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +2.0 +0.9 -0.5 -0.5 +0.2
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