Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2103 and Psest_2104 are separated by 126 nucleotidesPsest_2104 and Psest_2105 are separated by 149 nucleotidesPsest_2105 and Psest_2106 are separated by 2 nucleotidesPsest_2106 and Psest_2107 are separated by 27 nucleotides Psest_2103: Psest_2103 - Fatty acid cis/trans isomerase (CTI)., at 2,232,329 to 2,234,605 _2103 Psest_2104: Psest_2104 - IscR-regulated protein YhgI, at 2,234,732 to 2,235,316 _2104 Psest_2105: Psest_2105 - Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain, at 2,235,466 to 2,236,449 _2105 Psest_2106: Psest_2106 - diguanylate cyclase (GGDEF) domain, at 2,236,452 to 2,237,408 _2106 Psest_2107: Psest_2107 - Topoisomerase IB, at 2,237,436 to 2,238,380 _2107
Group Condition Psest_2103 Psest_2104 Psest_2105 Psest_2106 Psest_2107
carbon source L-Lactate (C) -0.3 -4.5 +0.6 +0.1 -0.3
stress Chlorite 0.06 mM -0.1 -2.8 -0.5 -0.4 -0.1
temperature Glucose defined 30C timecourse1 timepoint 3 -0.1 -3.6 -0.1 -0.0 -0.1
stress Nickel (II) chloride 0.8 mM -0.0 -3.8 +0.0 +0.2 -0.2
carbon source RCH2 defined media -0.0 -3.2 -0.3 +0.0 -0.0
stress perchlorate 25 mM +0.1 -3.4 -0.1 +0.1 -0.0
stress Cobalt chloride 0.06 mM +0.1 -3.5 +0.3 -0.1 -0.2
stress Furfuryl Alcohol 0.05 vol% -0.0 -2.4 -0.7 -0.0 -0.2
nitrogen source D-Alanine (N) -0.0 -3.3 +0.1 +0.1 -0.2
stress Vanillin 2 mM +0.1 -2.3 -0.6 -0.2 -0.1
lb LB -0.1 -2.6 -0.3 +0.1 -0.1
nitrogen source Ammonium chloride (N) -0.0 -3.1 +0.1 +0.0 +0.1
nitrogen source L-Alanine (N) +0.1 -2.7 -0.3 +0.2 -0.1
stress Def Cephalothin 0.04 mg/ml -0.1 -3.0 +0.5 +0.1 -0.3
stress 2-Furfuraldehyde 0.05 vol% -0.1 -2.5 -0.3 +0.1 +0.4
stress nitrate 250 mM -0.2 -2.7 +0.4 +0.4 -0.3
stress Def Polymyxin B sulfate 0.0001 mg/ml -0.1 -3.5 +1.0 +0.3 -0.1
nitrogen source D-Alanine (N) +0.0 -2.9 +0.2 +0.2 +0.1
nitrogen source nitrite (N) -0.0 -2.8 +0.5 +0.2 -0.1
stress Def Carbenicillin 0.02 mg/ml +0.0 -2.9 +0.4 +0.2 +0.2
stress Def Polymyxin B sulfate 0.00008 mg/ml -0.2 -2.5 +0.7 -0.0 -0.1
stress Def Benzethonium chloride 0.008 mM -0.2 -2.3 +0.9 +0.1 -0.2
carbon source RCH2 defined media -0.2 -2.1 +0.8 +0.2 -0.4
nitrogen source nitrite (N) +0.1 -2.5 +0.9 +0.3 +0.2
stress Choline Lysine 20 mM -0.0 +2.6 -0.3 +0.3 -0.1
carbon source L-tyrosine (C) -0.3 +4.0 -0.4 -0.1 +0.0
stress Chlorate 75 mM -0.2 +2.6 +0.2 +0.6 +0.2
stress Fusidic 0.016 mg/ml -0.1 +2.0 +1.3 +0.5 -0.3
stress Gentamicin 0.0016 mg/ml -0.4 +2.3 +0.9 +0.7 -0.1
carbon source L-tyrosine (C) -0.4 +4.1 +0.4 -0.2 +0.2
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