Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2101 and Psest_2102 are separated by 57 nucleotidesPsest_2102 and Psest_2103 are separated by 162 nucleotidesPsest_2103 and Psest_2104 are separated by 126 nucleotidesPsest_2104 and Psest_2105 are separated by 149 nucleotides Psest_2101: Psest_2101 - hypothetical protein, at 2,228,090 to 2,228,416 _2101 Psest_2102: Psest_2102 - 5-methyltetrahydrofolate--homocysteine methyltransferase, at 2,228,474 to 2,232,166 _2102 Psest_2103: Psest_2103 - Fatty acid cis/trans isomerase (CTI)., at 2,232,329 to 2,234,605 _2103 Psest_2104: Psest_2104 - IscR-regulated protein YhgI, at 2,234,732 to 2,235,316 _2104 Psest_2105: Psest_2105 - Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain, at 2,235,466 to 2,236,449 _2105
Group Condition Psest_2101 Psest_2102 Psest_2103 Psest_2104 Psest_2105
RCH2 grown on a colony of N2F3 -5.1 +1.6 +0.1 -1.4 +0.0
anaerobic Nitrite/ lactate media with Nitrite 20mM -2.8 -0.1 -0.2 -1.4 -0.2
temperature Glucose defined 30C timecourse1 timepoint 3 -0.3 +0.0 -0.1 -3.6 -0.1
carbon source D-Maltose (C) -0.6 -0.9 -0.0 -2.3 -0.1
carbon source L-Lactate (C) +0.2 +0.0 -0.3 -4.5 +0.6
stress Chlorite 0.06 mM -0.6 +0.1 -0.1 -2.8 -0.5
stress perchlorate 25 mM -0.1 +0.1 +0.1 -3.4 -0.1
nitrogen source D-Alanine (N) -0.5 +0.2 -0.0 -3.3 +0.1
stress Nickel (II) chloride 0.8 mM +0.2 +0.2 -0.0 -3.8 +0.0
nitrogen source Ammonium chloride (N) +0.4 -0.3 -0.0 -3.1 +0.1
stress Def Cephalothin 0.04 mg/ml -0.5 +0.1 -0.1 -3.0 +0.5
stress Cobalt chloride 0.06 mM +0.3 +0.0 +0.1 -3.5 +0.3
stress D-Cycloserine 0.032 mg/ml -1.5 +0.8 -0.2 -1.6 +0.0
RCH2 grown on a colony of N2C3 -3.5 +1.6 +0.0 -1.2 +0.9
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.4 +0.4 -0.1 -3.5 +1.0
stress Paraquat dichloride 0.015 mg/ml -0.7 +1.1 -0.2 -1.6 -0.3
stress nitrate 250 mM +0.8 +0.2 -0.2 -2.7 +0.4
nitrogen source nitrite (N) -0.2 +1.1 -0.0 -2.8 +0.5
stress Benzethonium chloride 0.0125 mM +1.4 -0.2 -0.2 -1.8 -0.6
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.3 +0.4 -0.2 -2.5 +0.7
radiation Ionizing radiation, 319.06 Gy, -2.1 -0.1 +0.0 +1.4 -0.3
stress Def Benzethonium chloride 0.008 mM +1.2 +0.1 -0.2 -2.3 +0.9
nitrogen source nitrite (N) +0.0 +1.3 +0.1 -2.5 +0.9
carbon source RCH2 defined media +1.0 +0.5 -0.2 -2.1 +0.8
stress Choline Lysine 20 mM -1.6 +1.1 -0.0 +2.6 -0.3
stress Gentamicin 0.0016 mg/ml -0.1 +0.6 -0.4 +2.3 +0.9
stress Fusidic 0.016 mg/ml +0.6 +0.2 -0.1 +2.0 +1.3
carbon source L-tyrosine (C) -1.5 +1.8 -0.4 +4.1 +0.4
stress Chlorate 75 mM +1.9 +0.2 -0.2 +2.6 +0.2
carbon source L-tyrosine (C) +3.5 +1.8 -0.3 +4.0 -0.4
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