Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_2085 and Psest_2086 are separated by 13 nucleotidesPsest_2086 and Psest_2087 are separated by 109 nucleotidesPsest_2087 and Psest_2088 are separated by 59 nucleotidesPsest_2088 and Psest_2089 overlap by 17 nucleotides Psest_2085: Psest_2085 - Periplasmic serine proteases (ClpP class), at 2,214,098 to 2,215,120 _2085 Psest_2086: Psest_2086 - putative quinone oxidoreductase, YhdH/YhfP family, at 2,215,134 to 2,216,126 _2086 Psest_2087: Psest_2087 - hypothetical protein, at 2,216,236 to 2,216,337 _2087 Psest_2088: Psest_2088 - Uncharacterized protein conserved in bacteria, at 2,216,397 to 2,216,897 _2088 Psest_2089: Psest_2089 - Sulfite reductase, beta subunit (hemoprotein), at 2,216,881 to 2,218,539 _2089
Group Condition Psest_2085 Psest_2086 Psest_2087 Psest_2088 Psest_2089
carbon source D-Alanine (C) -0.2 +0.0 N.D. -7.6 N.D.
carbon source D-Lactate (C) -0.1 -0.1 N.D. -7.3 N.D.
carbon source L-Glutamic (C) -0.1 -0.0 N.D. -7.4 N.D.
carbon source Trisodium citrate (C) +0.0 -0.1 N.D. -7.3 N.D.
nitrogen source L-Glutamine (N) -0.3 -0.1 N.D. -6.7 N.D.
nitrogen source L-Alanine (N) -0.2 -0.4 N.D. -6.6 N.D.
nitrogen source Adenine (N) -0.1 -0.1 N.D. -6.8 N.D.
temperature Glucose defined media 37C sample1 -0.1 -0.1 N.D. -6.7 N.D.
carbon source Tween 20 (C) +0.1 -0.1 N.D. -6.8 N.D.
carbon source acetate (C) +0.1 +0.1 N.D. -7.0 N.D.
nitrogen source L-Glutamine (N) +0.1 +0.1 N.D. -6.8 N.D.
nitrogen source L-Alanine (N) +0.1 -0.2 N.D. -6.3 N.D.
nitrogen source L-Proline (N) -0.4 -0.2 N.D. -5.5 N.D.
carbon source L-Asparagine (C) -0.2 +0.5 N.D. -6.4 N.D.
nitrogen source Adenine (N) -0.4 -0.2 N.D. -5.4 N.D.
stress Def Chlorate 40 mM -0.2 -0.2 N.D. -5.5 N.D.
nitrogen source L-Glutamic (N) -0.4 -0.0 N.D. -5.4 N.D.
RCH2 grown on a colony of N2F3 -0.3 -0.3 N.D. -5.1 N.D.
stress Lactate-nitrate; anaerobic; cobalt stress sample3 -0.2 -0.3 N.D. -5.1 N.D.
stress Def methylglyoxal 0.01 vol% -0.1 -0.3 N.D. -5.2 N.D.
stress Lactate-nitrate; anaerobic; dichromate stress sample2 -0.2 -0.4 N.D. -4.9 N.D.
carbon source L-Asparagine (C) -0.2 +0.1 N.D. -5.2 N.D.
nitrogen source D-Alanine (N) -0.1 -0.0 N.D. -5.0 N.D.
nitrogen source L-Alanine (N) +0.1 +0.1 N.D. -5.2 N.D.
carbon source RCH2 defined media -0.3 +0.1 N.D. -4.8 N.D.
nitrogen source nitrate (N) -0.0 +0.2 N.D. -5.2 N.D.
nitrogen source Glycine (N) +0.0 +0.2 N.D. -5.2 N.D.
nitrogen source L-Asparagine (N) -0.1 +0.1 N.D. -5.0 N.D.
nitrogen source L-Asparagine (N) -0.1 +0.3 N.D. -5.1 N.D.
stress Chlorate 75 mM +0.1 +0.2 N.D. +6.2 N.D.
remove
Psest_2085
plot		 remove
Psest_2086
plot		 remove
Psest_2087		 remove
Psest_2088
plot		 remove
Psest_2089
plot