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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2082 and Psest_2083 are separated by 209 nucleotides
Psest_2083 and Psest_2084 are separated by 58 nucleotides
Psest_2084 and Psest_2085 are separated by 181 nucleotides
Psest_2085 and Psest_2086 are separated by 13 nucleotides
Psest_2082: Psest_2082 - Predicted aminoglycoside phosphotransferase, at 2,211,568 to 2,212,635
_2082
Psest_2083: Psest_2083 - Putative sterol carrier protein, at 2,212,845 to 2,213,159
_2083
Psest_2084: Psest_2084 - Fructose-2,6-bisphosphatase, at 2,213,218 to 2,213,916
_2084
Psest_2085: Psest_2085 - Periplasmic serine proteases (ClpP class), at 2,214,098 to 2,215,120
_2085
Psest_2086: Psest_2086 - putative quinone oxidoreductase, YhdH/YhfP family, at 2,215,134 to 2,216,126
_2086
Group
Condition
Psest
_2082
Psest
_2083
Psest
_2084
Psest
_2085
Psest
_2086
RCH2 grown on a colony of Serratia
-0.2
-1.3
-1.0
-0.1
-0.7
carbon source
D-Glucose (C)
-0.1
-1.6
-0.4
-0.4
-0.2
stress
Carbenicillin 0.0065 mg/ml
+0.1
-1.9
-0.4
-0.5
+0.1
stress
Carbenicillin 0.008 mg/ml
-0.0
-1.7
-0.1
-0.4
-0.3
stress
Lactate-nitrate; anaerobic; dichromate stress sample2
-0.5
-1.4
-0.0
-0.2
-0.4
stress
syringaldehyde 3 mM
-0.1
-1.0
-0.8
-0.1
-0.1
nitrogen source
L-Glutamic (N)
+0.3
-0.9
-0.8
-0.1
-0.4
nitrogen source
Glycine (N)
-0.0
-1.9
-0.1
+0.0
+0.2
stress
nitrate 250 mM
-0.3
+0.4
-0.6
-0.9
-0.1
stress
Cisplatin 0.003 mg/ml
+0.0
-1.0
-0.4
-0.6
+0.5
stress
Carbenicillin 0.0065 mg/ml
+0.1
-1.1
+0.2
-0.4
-0.3
stress
Bacitracin 0.25 mg/ml
+0.0
-1.3
-0.7
+0.2
+0.3
stress
Gentamicin 0.0016 mg/ml
-0.3
+1.2
-0.0
-1.1
-0.3
stress
Paraquat dichloride 0.015 mg/ml
-0.2
+0.8
+0.6
-0.5
-0.9
stress
Choline chloride 90 mM
+0.0
+0.9
+0.1
-1.0
-0.2
stress
Choline chloride 90 mM
+0.1
+0.9
+1.1
-1.8
-0.2
stress
Paraquat dichloride 0.015 mg/ml
-0.2
+1.2
-0.1
-0.6
-0.2
stress
Fusidic 0.016 mg/ml
-0.1
+1.3
-0.2
-0.7
-0.2
stress
Nalidixic 0.00390625 mg/ml
+0.3
+0.2
+0.7
+0.2
-0.8
RCH2 grown on a colony of N2A2
-0.4
+0.7
-0.4
+0.6
+0.3
stress
Cephalothin 0.04 mg/ml
-0.4
+1.9
-0.0
-0.3
-0.1
stress
Choline Lysine 20 mM
+0.1
+2.0
-0.1
-0.9
-0.1
carbon source
RCH2 defined media
-0.1
+1.6
-0.0
-0.3
+0.1
stress
Choline Lysine 20 mM
-0.0
+1.7
+0.4
-0.4
-0.3
stress
Def Benzethonium chloride 0.008 mM
-0.1
+1.9
-0.1
-0.4
+0.1
stress
Def Carbenicillin 0.008 mg/ml
-0.3
+2.2
+0.2
-0.8
+0.5
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.2
+1.6
+0.3
-0.2
+0.5
stress
D-Cycloserine 0.032 mg/ml
+0.3
+1.3
+0.7
+0.2
+0.0
stress
D-Cycloserine 0.032 mg/ml
+0.1
+1.6
+0.6
+0.3
+0.1
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.1
+2.6
+0.2
-0.1
+0.3
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