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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_2076 and Psest_2077 are separated by 37 nucleotides
Psest_2077 and Psest_2078 overlap by 1 nucleotides
Psest_2078 and Psest_2079 overlap by 33 nucleotides
Psest_2079 and Psest_2080 are separated by 192 nucleotides
Psest_2076: Psest_2076 - Enoyl-CoA hydratase/carnithine racemase, at 2,205,726 to 2,206,538
_2076
Psest_2077: Psest_2077 - hypothetical protein, at 2,206,576 to 2,208,258
_2077
Psest_2078: Psest_2078 - NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding, at 2,208,258 to 2,209,088
_2078
Psest_2079: Psest_2079 - Predicted permeases, at 2,209,056 to 2,209,841
_2079
Psest_2080: Psest_2080 - hypothetical protein, at 2,210,034 to 2,210,681
_2080
Group
Condition
Psest
_2076
Psest
_2077
Psest
_2078
Psest
_2079
Psest
_2080
RCH2 grown on a colony of Serratia
+0.1
+0.3
-0.4
-3.8
-0.2
RCH2 grown on a colony of ecoli
+0.7
+0.4
-0.5
-4.1
-0.1
RCH2 grown on a colony of ecoli
+0.4
+0.5
+0.1
-4.3
-0.2
RCH2 grown on a colony of Serratia
+0.8
+0.4
-0.0
-3.2
-0.4
nitrogen source
Putrescine (N)
-0.1
-0.2
-0.0
-1.2
+0.0
stress
Gentamicin 0.0016 mg/ml
-0.1
-0.5
-0.7
-0.3
+0.1
nitrogen source
nitrite (N)
+0.0
+0.3
-0.3
-1.4
+0.1
nitrogen source
Adenine (N)
+0.1
+0.2
+0.1
-1.8
+0.1
nitrogen source
nitrite (N)
+0.0
-0.1
-0.1
-1.2
+0.2
stress
Chlorate 75 mM
+0.3
-0.2
-0.9
-0.5
+0.1
nitrogen source
nitrite (N)
+0.0
+0.1
+0.2
-1.6
+0.2
carbon source
propionate (C)
-0.4
-0.3
+0.2
-0.5
-0.2
stress
Furfuryl Alcohol 0.05 vol%
-0.1
-0.5
+0.3
-0.1
-0.5
stress
Def Carbenicillin 0.008 mg/ml
-0.8
-0.3
-0.4
+0.1
+0.5
nitrogen source
nitrate (N)
+0.2
+0.2
+0.3
-1.5
+0.1
nitrogen source
Parabanic Acid (N)
+0.2
+0.2
+0.1
-1.2
+0.1
nitrogen source
Putrescine (N)
+0.4
-0.1
+0.0
-1.2
+0.2
nitrogen source
D-Alanine (N)
+0.3
+0.1
-0.0
-1.0
+0.1
nitrogen source
nitrate (N)
+0.3
+0.1
-0.0
-0.9
+0.1
nitrogen source
L-Alanine (N)
+0.3
-0.2
-0.2
-0.5
+0.2
nitrogen source
nitrate (N)
+0.2
+0.0
+0.2
-0.9
+0.2
anaerobic
Nitrite/ lactate media with Nitrite 20mM
-0.4
+0.2
+0.5
-0.2
-0.2
stress
nitrite 2.5 mM
+0.3
-0.2
+0.4
-0.5
+0.0
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.5
+0.5
-0.1
-0.4
-0.1
RCH2 grown on a colony of N2C3
+0.8
+0.2
+0.2
-0.6
-0.1
anaerobic
Nitrate/ lactate media with Nitrate 250mM
-0.5
+0.4
+0.5
+0.0
+0.1
RCH2 grown on a colony of 8R2A
+1.3
-0.2
-0.1
-0.4
+0.0
RCH2 grown on a colony of N2A2
+0.4
+0.3
+0.4
-0.4
+0.1
RCH2 grown on a colony of N2A2
+0.7
+0.2
+0.1
-0.3
+0.4
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.1
-0.1
-0.2
+0.8
+0.9
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