Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2070 and Psest_2071 are separated by 209 nucleotidesPsest_2071 and Psest_2072 are separated by 111 nucleotidesPsest_2072 and Psest_2073 are separated by 37 nucleotidesPsest_2073 and Psest_2074 are separated by 14 nucleotides Psest_2070: Psest_2070 - FOG: LysM repeat, at 2,198,658 to 2,200,106 _2070 Psest_2071: Psest_2071 - hydroxyacylglutathione hydrolase, at 2,200,316 to 2,201,095 _2071 Psest_2072: Psest_2072 - Methyltransferase domain., at 2,201,207 to 2,201,977 _2072 Psest_2073: Psest_2073 - Ribonuclease HI, at 2,202,015 to 2,202,470 _2073 Psest_2074: Psest_2074 - DNA polymerase III, epsilon subunit, Proteobacterial, at 2,202,485 to 2,203,210 _2074
Group Condition Psest_2070 Psest_2071 Psest_2072 Psest_2073 Psest_2074
stress methylglyoxal 0.0016 vol% -0.3 -6.4 -0.8 N.D. N.D.
stress Def methylglyoxal 0.01 vol% +0.1 -7.8 +0.5 N.D. N.D.
stress Cephalothin 0.04 mg/ml -1.9 -0.6 -0.5 N.D. N.D.
stress nitrate 250 mM -1.5 -0.7 +0.1 N.D. N.D.
temperature LB 30C timecourse1 timepoint 3 -0.8 -0.5 -0.5 N.D. N.D.
stress Bacitracin 0.25 mg/ml -1.5 +0.3 -0.5 N.D. N.D.
stress Def Vancomycin 0.016 mg/ml -1.8 -0.1 +0.3 N.D. N.D.
stress Def Carbenicillin 0.008 mg/ml -1.0 -0.6 +0.2 N.D. N.D.
stress Def Cephalothin 0.08 mg/ml -1.2 -0.4 +0.3 N.D. N.D.
stress Nalidixic 0.00390625 mg/ml -0.4 +0.5 -1.4 N.D. N.D.
stress Carbenicillin 0.008 mg/ml -1.2 -0.3 +0.5 N.D. N.D.
stress Def Vancomycin 0.008 mg/ml -1.1 -0.2 +0.5 N.D. N.D.
carbon source L-tyrosine (C) -1.0 -0.2 +2.1 N.D. N.D.
carbon source L-Isoleucine (C) +0.1 -0.5 +1.7 N.D. N.D.
carbon source Ethanol (C) +0.1 -0.5 +1.8 N.D. N.D.
carbon source L-Leucine (C) +0.2 -0.1 +1.5 N.D. N.D.
carbon source L-Isoleucine (C) +0.0 -0.3 +1.9 N.D. N.D.
stress Choline chloride 90 mM +1.5 +0.6 -0.5 N.D. N.D.
carbon source L-tyrosine (C) -0.4 -0.0 +2.1 N.D. N.D.
carbon source L-Leucine (C) +0.3 -0.0 +1.5 N.D. N.D.
stress L-Lysine 200 mM +1.2 -0.1 +0.7 N.D. N.D.
carbon source L-Glutamine (C) +0.6 -0.2 +1.4 N.D. N.D.
RCH2 grown on a colony of Serratia +0.1 +0.6 +1.1 N.D. N.D.
nitrogen source L-Valine (N) +0.2 -0.1 +1.7 N.D. N.D.
nitrogen source L-Valine (N) +0.6 -0.4 +1.7 N.D. N.D.
carbon source Ethanol (C) +0.1 -0.1 +1.9 N.D. N.D.
stress L-Lysine 200 mM +1.5 +0.1 +0.4 N.D. N.D.
carbon source L-Glutamine (C) +0.7 -0.2 +1.5 N.D. N.D.
carbon source L-Glutamine (C) +0.6 -0.0 +1.6 N.D. N.D.
RCH2 grown on a colony of N2C3 +0.8 +0.4 +1.2 N.D. N.D.
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